Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Globodera_20ellingtonae_20[genbank_20GCA_5F001723225.1_202016-09-12] 2,246 sequences; 105,964,814 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq26 82.4 1e-10 seq7 82.4 1e-10 >seq26 Length=597700 Score = 82.4 bits (90), Expect = 1e-10 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 145289 TAGTGTAGTGGTCATCACTTTGGACTTTGAATCCAACAACCCTGGTTCAAATCCAGGTAG 145348 |||||||||||| ||||| ||||||||||||||||| ||||| ||||| ||||| || || Sbjct 147815 TAGTGTAGTGGTGATCACATTGGACTTTGAATCCAATAACCCCGGTTCGAATCCGGGCAG 147756 Query 145349 GAGCT 145353 || || Sbjct 147755 GACCT 147751 >seq7 Length=1101385 Score = 82.4 bits (90), Expect = 1e-10 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 145284 TCTTATAGTGTAGTGGTCATCACTTTGGACTTTGAATCCAACAACCCTGGTTCAAATCCA 145343 || ||| ||||||||| |||||| ||||||||||||||| |||||| ||||| ||||| Sbjct 952273 TCCTATGGTGTAGTGGCTATCACTCTGGACTTTGAATCCAGCAACCCCGGTTCGAATCCG 952214 Query 145344 GGTAGGAGCT 145353 ||||||| || Sbjct 952213 GGTAGGACCT 952204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628014368001600