Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Globodera_20pallida_20[genbank_20GCA_5F000724045.1_202014-05-30] 6,873 sequences; 123,625,196 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq38 82.4 7e-11 >seq38 Length=214606 Score = 82.4 bits (90), Expect = 7e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 13713 TGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGA 13772 ||||| || |||| | || |||||||||| ||| || ||||| || || |||||| Sbjct 74883 TGTTAGGCCAGGCAGAAGGCCACGTTTTTTTAGCCAGAAAATTGCGGCAAAACTTCCGGA 74942 Query 13773 AAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAA 13820 ||||| || |||||||||||||||||||| | |||| ||| |||| Sbjct 74943 GAAGAAAATGCCCTCAACTGCAGCAAACGCAACGAGTCTTTCCGCAAA 74990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478547683239720