Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Globodera_20pallida_20[genbank_20GCA_5F000724045.1_202014-05-30] 6,873 sequences; 123,625,196 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq269 91.5 1e-13 >seq269 Length=200655 Score = 91.5 bits (100), Expect = 1e-13 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 94485 GGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCA 94544 |||||| || ||||| ||||| |||||||||||| | ||| ||||| || ||||| Sbjct 150074 GGAGACCGGCACGCCGTACATGTTGTTCAAGGACGCGTGCAATCGGAAGTCAAATCAGCA 150015 Query 94545 GCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCC 94604 || | || || || |||| ||| |||||||||| || | || ||| | || || Sbjct 150014 AAACTTGGGCACCATAAAATGCTCAAATTTGTGCACCGAAATCATTGAATATTCGTCACC 149955 Query 94605 GGACGAGATTGCTGTGTGTAACCTGGGCTCCAT 94637 ||| |||| |||||||| ||| ||| |||||| Sbjct 149954 GGATGAGACCGCTGTGTGCAACTTGGCCTCCAT 149922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494680697093080