Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Globodera_20pallida_20[genbank_20GCA_5F000724045.1_202014-05-30] 6,873 sequences; 123,625,196 total letters Query= NC_012749.1 Length=88487 Score E Sequences producing significant alignments: (Bits) Value seq1544 95.1 7e-15 >seq1544 Length=2721 Score = 95.1 bits (104), Expect = 7e-15 Identities = 107/141 (76%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 87436 ATCACGTTGGAACGTGCAAACGAAATCCTGAAGCGTCTGTATGAAATGGGGTTTGCAAGC 87495 ||||| ||||||||||| | |||||||| | |||||| ||| | ||| || || Sbjct 867 ATCACTCTGGAACGTGCAGAACAAATCCTGCAACGTCTG-ATGGATAAGGGCTTCAGTGC 809 Query 87496 TC-TAACGTGGTGTTTGGTGTAGGCTCTTACACTTACCAGTACATGACTCGTGACACCTT 87554 | |||| | ||||| ||||||||||| ||||| ||||||||||| ||||||||||| || Sbjct 808 TGGTAACATCGTGTTCGGTGTAGGCTCGTACACCTACCAGTACATCACTCGTGACACGTT 749 Query 87555 TGCATTTGCTGTCAAAGCAAC 87575 | | ||| |||| || || Sbjct 748 CGGCATGGCTATCAAGGCTAC 728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 283009891778944