Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Globodera_20pallida_20[genbank_20GCA_5F000724045.1_202014-05-30]
6,873 sequences; 123,625,196 total letters
Query= NC_014461.1
Length=73453
Score E
Sequences producing significant alignments: (Bits) Value
seq1544 87.8 8e-13
>seq1544
Length=2721
Score = 87.8 bits (96), Expect = 8e-13
Identities = 117/159 (74%), Gaps = 3/159 (2%)
Strand=Plus/Minus
Query 49084 AACGTGGTGTTCGGTGTCGGCTCTTACACGTATCAGCACAACACGCGTGACACGTTCGGG 49143
||| | ||||||||||| ||||| ||||| || ||| ||| ||| ||||||||||||||
Sbjct 804 AACATCGTGTTCGGTGTAGGCTCGTACACCTACCAGTACATCACTCGTGACACGTTCGGC 745
Query 49144 TCCGCGATGAAGGCGACGTGGGTAAAGGTCGGC-GCGAAGGAATACAACCTCCTGAAGAA 49202
|| || ||||| ||||||| | |||| | | ||||| ||| ||| ||| |
Sbjct 744 ATGGCTATCAAGGCTACGTGGG-ACAGGTGAACGGTGAAGG-TCGTAACATCCAGAAAGA 687
Query 49203 CCCGGTGACGGACGACGGGACAAAGAAGTCCGCGACGGG 49241
|||| ||| | |||||| | |||||||| || || ||
Sbjct 686 CCCGAAGACCGGCGACGGTATGAAGAAGTCTGCAACTGG 648
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 234905121597542
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |