Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Globodera_20pallida_20[genbank_20GCA_5F000724045.1_202014-05-30] 6,873 sequences; 123,625,196 total letters Query= NC_016071.1 Length=145964 Score E Sequences producing significant alignments: (Bits) Value seq1544 86.0 6e-12 >seq1544 Length=2721 Score = 86.0 bits (94), Expect = 6e-12 Identities = 118/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 72375 CGTTGCTTTCACAGCCATACCCAGTGAATCACGAGTTGTGTACTGGGTTGTGTAAGAACC 72434 ||| || || | |||||| || | | |||||||| |||||||| ||||| || || Sbjct 727 CGTAGCCTTGATAGCCATGCCGAACGTGTCACGAGTGATGTACTGGTAGGTGTACGAGCC 786 Query 72435 AACACCGTACACGATGTTACTCGATGCAAAGCCACGATCTTTCAGTCGTTCAAAGATATC 72494 |||||| |||||||||||| | ||||| ||| |||| |||| | ||| | Sbjct 787 TACACCGAACACGATGTTACCAGCACTGAAGCCCTTATCCATCAGACGTTGCAGGATTTG 846 Query 72495 TTTTGCACGAGCAACAGTGATAGAGTCACCGTAGATCAGGCCGAC 72539 || |||||| | | |||||| |||||||| ||||||||||| Sbjct 847 TTCTGCACGTTCCAGAGTGATGCTATCACCGTAAATCAGGCCGAC 891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 466916682573920