Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Globodera_20pallida_20[genbank_20GCA_5F000724045.1_202014-05-30] 6,873 sequences; 123,625,196 total letters Query= NC_019402.1 Length=76631 Score E Sequences producing significant alignments: (Bits) Value seq1544 89.7 3e-13 >seq1544 Length=2721 Score = 89.7 bits (98), Expect = 3e-13 Identities = 170/249 (68%), Gaps = 1/249 (0%) Strand=Plus/Plus Query 69074 CAGCAACCCTTTGGCAGACTTCTTAGTACCATCATCGGTCGCTGGGTCTTTGAAGATTTC 69133 |||||| || | ||||||||||| |||| || ||||| |||||||| ||| | Sbjct 641 CAGCAAGCCAGTTGCAGACTTCTTCATACCGTCGCCGGTCTTCGGGTCTTTCTGGATGTT 700 Query 69134 ACGACCAACACCATTAACTTCACCATAGGTTGCTTTCATGGCGAAACCAAAGGTATCACG 69193 |||||| |||| || || | || | || || || || || | || || || ||||| Sbjct 701 ACGACCTTCACCGTTCACCTGTCCC-ACGTAGCCTTGATAGCCATGCCGAACGTGTCACG 759 Query 69194 GGTTACATACTGGTAAGTGTATGAACCAATGCCGAGTACTACGTTTGAAGATGCGAAATC 69253 || | |||||||| ||||| || || | |||| || | ||| || ||| | Sbjct 760 AGTGATGTACTGGTAGGTGTACGAGCCTACACCGAACACGATGTTACCAGCACTGAAGCC 819 Query 69254 CTTCGCGGCGAGGCGAGCAAAGATTTCTTCGGCACGTTCCATAGTGATTGAATCACCATA 69313 ||| | || || | ||||| ||| |||||||||| |||||| |||||| || Sbjct 820 CTTATCCATCAGACGTTGCAGGATTTGTTCTGCACGTTCCAGAGTGATGCTATCACCGTA 879 Query 69314 AATCAGGCC 69322 ||||||||| Sbjct 880 AATCAGGCC 888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 245073869744176