Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Globodera_20pallida_20[genbank_20GCA_5F000724045.1_202014-05-30] 6,873 sequences; 123,625,196 total letters Query= NC_019405.1 Length=215710 Score E Sequences producing significant alignments: (Bits) Value seq2386 93.3 6e-14 >seq2386 Length=1330 Score = 93.3 bits (102), Expect = 6e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 137241 CATCATCTCCTTGGCCTTCTCGATGAAGATGCGGCCGATGGTGTTGCCGACGCCGCGCGA 137300 ||||| |||||| |||| | |||| || | |||||| ||||||| | ||| || || Sbjct 794 CATCAGCTCCTTACCCTTGTTGATGTAGTAGGAGCCGATCATGTTGCCAATGCCACGGGA 853 Query 137301 GCCCGAGTGGAGCATCACCCAGACGCGCTGGTCCTCGTCGAGGCAGACCTCGATGAAGTG 137360 ||| ||||| ||||| ||||||||| | | ||||| | ||||| ||||||||||| Sbjct 854 GCCAGAGTGCAGCATAACCCAGACGTCTTCATTTTCGTCAATGCAGATTTCGATGAAGTG 913 Query 137361 GTTGCC 137366 |||||| Sbjct 914 GTTGCC 919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 690084708003600