Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Globodera_20pallida_20[genbank_20GCA_5F000724045.1_202014-05-30] 6,873 sequences; 123,625,196 total letters Query= NC_019407.1 Length=218929 Score E Sequences producing significant alignments: (Bits) Value seq2386 91.5 2e-13 >seq2386 Length=1330 Score = 91.5 bits (100), Expect = 2e-13 Identities = 98/127 (77%), Gaps = 2/127 (2%) Strand=Plus/Plus Query 136001 CATCATCTCCTTGGCCTTCTCGATGAAGATACG-GCCGATGGTGTTGCCGACGCCGCGCG 136059 ||||| |||||| |||| | |||| || || | |||||| ||||||| | ||| || | Sbjct 794 CATCAGCTCCTTACCCTTGTTGATGTAG-TAGGAGCCGATCATGTTGCCAATGCCACGGG 852 Query 136060 AGCCCGAGTGGAGCATCACCCAGACGCGCTGGTCCTCGTCGAGGCAGACCTCGATGAAGT 136119 |||| ||||| ||||| ||||||||| | | ||||| | ||||| |||||||||| Sbjct 853 AGCCAGAGTGCAGCATAACCCAGACGTCTTCATTTTCGTCAATGCAGATTTCGATGAAGT 912 Query 136120 GGTTGCC 136126 ||||||| Sbjct 913 GGTTGCC 919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 700384623036120