Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Globodera_20pallida_20[genbank_20GCA_5F000724045.1_202014-05-30] 6,873 sequences; 123,625,196 total letters Query= NC_023601.1 Length=97906 Score E Sequences producing significant alignments: (Bits) Value seq1920 82.4 5e-11 >seq1920 Length=1769 Score = 82.4 bits (90), Expect = 5e-11 Identities = 98/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 76291 GGACAACTTCTTCTGGCTGCGTAACCATGAAGACGCTCAGCCTGAGATTCGTGAACTGGC 76350 |||||||||||||||||||||| || |||||| ||| | || |||| ||||||||| Sbjct 35 GGACAACTTCTTCTGGCTGCGTGACGATGAAGCTGCTGACCCAACGATTGCTGAACTGGC 94 Query 76351 TCGTTTGATGTGGGAAGCTTTGCAAGAGAGTAAGCCTAATGAGTTGAAAGCTGGGCAGTG 76410 ||| ||||| |||| ||| | | | ||||||| | | |||| || || | || Sbjct 95 ACGTGTGATGCGGGAGGCTAAGGATACGTCTAAGCCTGAACTGCTGAAGGCAGGTGAATG 154 Query 76411 GCATGTTCCTTAT 76423 |||| |||| ||| Sbjct 155 GCATCTTCCGTAT 167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 313148167044251