Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Globodera_20pallida_20[genbank_20GCA_5F000724045.1_202014-05-30] 6,873 sequences; 123,625,196 total letters Query= NC_027351.1 Length=147745 Score E Sequences producing significant alignments: (Bits) Value seq1544 86.0 6e-12 >seq1544 Length=2721 Score = 86.0 bits (94), Expect = 6e-12 Identities = 118/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 142316 GTCGGCCTGATCTACGGTGACTCTATCACTGTTGCTCGTGCAAAAGATATCTTTGAACGA 142375 ||||||||||| |||||||| |||||| | | |||||| || | ||| | |||| Sbjct 891 GTCGGCCTGATTTACGGTGATAGCATCACTCTGGAACGTGCAGAACAAATCCTGCAACGT 832 Query 142376 CTGAAAGATCGTGGCTTTGCATCGAGTAACATCGTGTACGGTGTTGGTTCTTACACAACC 142435 |||| ||| ||||| | |||||||||||| |||||| || || ||||| | Sbjct 831 CTGATGGATAAGGGCTTCAGTGCTGGTAACATCGTGTTCGGTGTAGGCTCGTACACCTAC 772 Query 142436 CAGTACACAACTCGTGATTCACTGGGTATGGCTGTGAAAGCAACG 142480 ||||||| |||||||| | | || |||||| | || || ||| Sbjct 771 CAGTACATCACTCGTGACACGTTCGGCATGGCTATCAAGGCTACG 727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472615392941400