Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Globodera_20pallida_20[genbank_20GCA_5F000724045.1_202014-05-30] 6,873 sequences; 123,625,196 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq38 95.1 1e-14 >seq38 Length=214606 Score = 95.1 bits (104), Expect = 1e-14 Identities = 73/87 (84%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 43904 CGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCC 43963 || ||||| ||||| |||||| | || || || || || |||||||| || ||||||||| Sbjct 75288 CGTTTTGCCCAAGAGGTTCAAATTCCTGAGGCTCGCTGCTTTTATGGCTTCCAAATTGCC 75229 Query 43964 ATAGAAAATATTCATTCGGAAATGTAC 43990 || ||||| |||||||||||||||||| Sbjct 75228 ATTGAAAACATTCATTCGGAAATGTAC 75202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397422707222365