Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Globodera_20pallida_20[genbank_20GCA_5F000724045.1_202014-05-30] 6,873 sequences; 123,625,196 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq269 120 4e-22 >seq269 Length=200655 Score = 120 bits (132), Expect = 4e-22 Identities = 160/222 (72%), Gaps = 8/222 (4%) Strand=Plus/Plus Query 118706 AAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAAT 118765 ||| || || || |||| || ||||||| |||||||||| | || || || || Sbjct 149915 AAGCGCAATGGAGGCCAAGTTGCACACAGCGGTCTCATCCGGTGACGAATATTCAATGAT 149974 Query 118766 TTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTT 118825 ||| |||||||| ||||| | || |||||||||||||| | ||||||||||| || Sbjct 149975 TTCGGTGCACAAATTTGAGCATTTTATGGTGCCCAAGTTTTGCTGATTTGACTTCCGATT 150034 Query 118826 ACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGC 118885 ||||| |||||| | | |||||| ||||| || |||||||| || || ||| || Sbjct 150035 GCACGCGTCCTTGAACAACATGTACGGCGTGCCGGTCTCCGTCTGCGAACTGATGATGCT 150094 Query 118886 CTTCCAGACAT-------CGGCAGCTGGC-ACAGTGGCGTTG 118919 |||||| || | ||||||||||| ||| |||||| Sbjct 150095 CTTCCACACTTCACGGGCCGGCAGCTGGCGACAAAAGCGTTG 150136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618382068685880