Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gongylonema_20pulchrum_20[genbank_20GCA_5F000951235.1_202014-09-25]
128,401 sequences; 322,334,493 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq65209 104 2e-17
seq29780 82.4 6e-11
>seq65209
Length=1292
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023
|| || | ||||||||| || |||||||| |||||||| |||| || || | |||||
Sbjct 476 AGGACGAGATGCAAAGTCGATTCCTTTTGGATGTTATAATCCGACAAAGTGCGACCGTCC 535
Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083
|||| ||| ||||| ||| ||||||| | ||||| ||| || | || || |||||
Sbjct 536 TCCAACTGCTTGCCGGCAAAAATAAGACGTTGCTGATCCGGAGGGATACCCTCTTTGTCC 595
Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143
|||||| || || | | | || || | |||| ||||| || || |||
Sbjct 596 TGGATCTTCGCCTTAACGTTCTCAATGGTGTCCGATGCCTCCACTTCCAGAGTGATTGTC 655
Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
||||| || ||||||||||| || || |||||
Sbjct 656 TTGCCCGTCAACGTTTTGACGAAAATCTGCAT 687
>seq29780
Length=3062
Score = 82.4 bits (90), Expect = 6e-11
Identities = 78/100 (78%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || ||||||| | ||||| ||| | || ||||||||||| ||||| ||||||| |
Sbjct 649 CCGCCGCGCAGCCGTAACACCAAATGAAGCGTTGACTCCTTTTGGATGTTGTAGTCCGAC 708
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAA 21048
|| ||| || | |||||||| |||||||| || ||| ||
Sbjct 709 AGCGTTCGGCCATCCTCCAGTTGTTTGCCTACAGAAAAAA 748
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421598411988116
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |