Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gongylonema_20pulchrum_20[genbank_20GCA_5F000951235.1_202014-09-25] 128,401 sequences; 322,334,493 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq1136 82.4 5e-11 >seq1136 Length=16860 Score = 82.4 bits (90), Expect = 5e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 97426 TGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTATCT 97485 ||||| |||||||| ||||| | ||| ||||||| | || ||| ||||| || || Sbjct 16293 TGGAAGCCATAAACTGGTCCTAAGTCGCCTTCTTGGCGGTCCGTGAAGCCAAGTTTGTCC 16352 Query 97486 AAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACCAGATGCTG-CAAGCTCTTT 97544 | | || || ||||||||||||||||| | ||||| | | ||| |||| Sbjct 16353 AGGAACTGCCGTGACCCATTTGCATCCCAAATCTTAACACCTTTGTCAGACAAATGCTTT 16412 Query 97545 GCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACAACACCTCTCCAAAATAC 97604 || || ||| || ||||||||||||| || |||||||| ||| ||| |||| | || Sbjct 16413 GCATTC-GTATCGCCCCTGATAAACCACAGCAGTTCTTCCAGAACTCCTTTCCAGTAGAC 16471 Query 97605 TCTCTTAGTTGT 97616 | || ||||| Sbjct 16472 CCGTTTTGTTGT 16483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346241322161570