Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gongylonema_20pulchrum_20[genbank_20GCA_5F000951235.1_202014-09-25] 128,401 sequences; 322,334,493 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq8215 87.8 2e-12 >seq8215 Length=7488 Score = 87.8 bits (96), Expect = 2e-12 Identities = 145/207 (70%), Gaps = 8/207 (4%) Strand=Plus/Minus Query 65981 TTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGA 66040 |||||||||||| ||||| || ||||| |||| ||||||| | |||||||||| || Sbjct 6213 TTCGAACTCGTCGCCCCATGAATCTTCCAAGCCAGTACATTCAGCAGGACACATCAGTGA 6154 Query 66041 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 66100 ||| ||| ||||| ||| |||||||| || ||||| || | ||| | | | || Sbjct 6153 CCATTCTTTATCATCACGCACACGTTTCATGAAAAGATCTGGCACCCATAAACCGCAGAA 6094 Query 66101 TAAATCTC----TGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACG 66156 ||||||| | |||| | || ||| || ||| ||| | ||| | |||| Sbjct 6093 CAAATCTCGACAGCGCTCTA-GCTCATCG---CCAACATTTTTTCGCATATCCAAGAACT 6038 Query 66157 CCATAATATCATAATGCCACGGTTCCA 66183 | | ||||||| |||||| ||||||| Sbjct 6037 CAAAAATATCAGCATGCCAAGGTTCCA 6011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657116424428840