Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gongylonema_20pulchrum_20[genbank_20GCA_5F000951235.1_202014-09-25] 128,401 sequences; 322,334,493 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq8215 96.9 5e-15 >seq8215 Length=7488 Score = 96.9 bits (106), Expect = 5e-15 Identities = 147/207 (71%), Gaps = 8/207 (4%) Strand=Plus/Minus Query 71943 TTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGA 72002 |||||||||||| ||||| | || || || |||| ||||||| |||||||||| ||| Sbjct 6213 TTCGAACTCGTCGCCCCATGAATCTTCCAAGCCAGTACATTCAGCAGGACACATCAGTGA 6154 Query 72003 CCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 72062 ||| ||| ||||||| || |||||||| || ||||| || | ||| | | | || Sbjct 6153 CCATTCTTTATCATCACGCACACGTTTCATGAAAAGATCTGGCACCCATAAACCGCAGAA 6094 Query 72063 TAGATCTC----TGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACG 72118 | ||||| | |||| |||| ||| || ||| ||| | ||| | |||| Sbjct 6093 CAAATCTCGACAGCGCTCTA-GCTCATCG---CCAACATTTTTTCGCATATCCAAGAACT 6038 Query 72119 CCATAATATCAGAATGCCACGGTTCCA 72145 | | |||||||| |||||| ||||||| Sbjct 6037 CAAAAATATCAGCATGCCAAGGTTCCA 6011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 670062013194760