Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gongylonema_20pulchrum_20[genbank_20GCA_5F000951235.1_202014-09-25]
128,401 sequences; 322,334,493 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq8215 96.9 5e-15
>seq8215
Length=7488
Score = 96.9 bits (106), Expect = 5e-15
Identities = 147/207 (71%), Gaps = 8/207 (4%)
Strand=Plus/Minus
Query 71943 TTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGA 72002
|||||||||||| ||||| | || || || |||| ||||||| |||||||||| |||
Sbjct 6213 TTCGAACTCGTCGCCCCATGAATCTTCCAAGCCAGTACATTCAGCAGGACACATCAGTGA 6154
Query 72003 CCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 72062
||| ||| ||||||| || |||||||| || ||||| || | ||| | | | ||
Sbjct 6153 CCATTCTTTATCATCACGCACACGTTTCATGAAAAGATCTGGCACCCATAAACCGCAGAA 6094
Query 72063 TAGATCTC----TGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACG 72118
| ||||| | |||| |||| ||| || ||| ||| | ||| | ||||
Sbjct 6093 CAAATCTCGACAGCGCTCTA-GCTCATCG---CCAACATTTTTTCGCATATCCAAGAACT 6038
Query 72119 CCATAATATCAGAATGCCACGGTTCCA 72145
| | |||||||| |||||| |||||||
Sbjct 6037 CAAAAATATCAGCATGCCAAGGTTCCA 6011
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 670062013194760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |