Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gongylonema_20pulchrum_20[genbank_20GCA_5F000951235.1_202014-09-25]
128,401 sequences; 322,334,493 total letters
Query= NC_004778.3
Length=129593
Score E
Sequences producing significant alignments: (Bits) Value
seq29780 82.4 6e-11
>seq29780
Length=3062
Score = 82.4 bits (90), Expect = 6e-11
Identities = 142/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 18839 TGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGT 18898
||||| || ||||| || || || || ||||||| | || |||| ||||||||
Sbjct 30 TGCAAAGTCGACTCTTTCTGTATGTTATAATCCGATAGAGTGCGACCGTCTTCCAGCTGC 89
Query 18899 TTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTC 18958
|| || ||| |||| | | ||||||||| ||| | ||| |||||||| || |||
Sbjct 90 TTGCCGGCAAAAATTAAGCGCTGCTGATCTGGGGGGATGCCTTCTTTGTCCTGGATCTTC 149
Query 18959 TGTTTTACCTGGCCGACAGTATCGCCAGGCT-CCGTTTCGACGGTAATGGTTTTACCTGT 19017
|| || | ||| ||||| | | ||| || ||| | || || || || || ||
Sbjct 150 GCCTTGACGTTTTCGATCGTATC-CGACGCTTCCACTTCCAAAGTGATCGTCTTCCCCGT 208
Query 19018 TAAAGTTTTGACAAAAATTTGCAT 19041
||||||||||| |||||||||||
Sbjct 209 CAAAGTTTTGACGAAAATTTGCAT 232
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 413924040336994
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |