Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gongylonema_20pulchrum_20[genbank_20GCA_5F000951235.1_202014-09-25] 128,401 sequences; 322,334,493 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq29780 82.4 6e-11 >seq29780 Length=3062 Score = 82.4 bits (90), Expect = 6e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 18839 TGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGT 18898 ||||| || ||||| || || || || ||||||| | || |||| |||||||| Sbjct 30 TGCAAAGTCGACTCTTTCTGTATGTTATAATCCGATAGAGTGCGACCGTCTTCCAGCTGC 89 Query 18899 TTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTC 18958 || || ||| |||| | | ||||||||| ||| | ||| |||||||| || ||| Sbjct 90 TTGCCGGCAAAAATTAAGCGCTGCTGATCTGGGGGGATGCCTTCTTTGTCCTGGATCTTC 149 Query 18959 TGTTTTACCTGGCCGACAGTATCGCCAGGCT-CCGTTTCGACGGTAATGGTTTTACCTGT 19017 || || | ||| ||||| | | ||| || ||| | || || || || || || Sbjct 150 GCCTTGACGTTTTCGATCGTATC-CGACGCTTCCACTTCCAAAGTGATCGTCTTCCCCGT 208 Query 19018 TAAAGTTTTGACAAAAATTTGCAT 19041 ||||||||||| ||||||||||| Sbjct 209 CAAAGTTTTGACGAAAATTTGCAT 232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 413924040336994