Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gongylonema_20pulchrum_20[genbank_20GCA_5F000951235.1_202014-09-25] 128,401 sequences; 322,334,493 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq25 98.7 1e-15 >seq25 Length=42703 Score = 98.7 bits (108), Expect = 1e-15 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 164783 TTCATGATGCAGTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATA 164842 |||| || | |||||||||||||| | ||||||| ||||| || || || |||| Sbjct 24830 TTCACGACACGGTGGTTAATCAGTTATTGGCTAAAATGGATGGCGTTGAGCAGTTGAATA 24889 Query 164843 ATATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGAC 164902 | ||| | | | |||||||| || || ||| | |||||||| || || |||||| Sbjct 24890 ACATTCTTGTGATTGGTATGACAAATCGTAAAGATATGATTGATGAGGCACTACTACGAC 24949 Query 164903 CTGGTCGATTAGAATTGAAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAA 164962 ||||||| | ||| || |||| ||||| || ||||| | | || ||| | |||| Sbjct 24950 CTGGTCGTATGGAAGTGCAAATGGAAATTTCGTTGCCCGATGAGAATGGTCGCTTGCAAA 25009 Query 164963 TTTTAAAAGTTCATGTGGCTAAAATGA 164989 |||| ||| |||| |||| ||||| Sbjct 25010 TTTTGAAAATTCACACTGCTAGAATGA 25036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594915617991600