Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gongylonema_20pulchrum_20[genbank_20GCA_5F000951235.1_202014-09-25] 128,401 sequences; 322,334,493 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq3361 98.7 1e-15 >seq3361 Length=11312 Score = 98.7 bits (108), Expect = 1e-15 Identities = 88/109 (81%), Gaps = 1/109 (1%) Strand=Plus/Minus Query 93110 AAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGT 93169 |||||| |||||| ||| |||||||| || ||| || ||||| | | | || ||| Sbjct 2189 AAACCT-CGTCTCTTGAAATCAACTCGTTACTGTGCGTCAAACCAGACATTAAACCGCGT 2131 Query 93170 TTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTT 93218 ||||||||||||||||||| ||||||||| ||||| |||||||| |||| Sbjct 2130 TTCTTGAGCCAAAATATTGCAGCAAAACTTCCAGAGAAAAATATTCCTT 2082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 555967031455240