Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gongylonema_20pulchrum_20[genbank_20GCA_5F000951235.1_202014-09-25]
128,401 sequences; 322,334,493 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq55198 123 1e-22
seq1065 96.9 1e-14
seq23395 84.2 9e-11
>seq55198
Length=1598
Score = 123 bits (136), Expect = 1e-22
Identities = 161/223 (72%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 451232 AAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCA 451291
||||| ||||| || |||||||||||| | |||||| | || |||||||| |||| |||
Sbjct 1248 AAAACGTTTGCCCCGGAAGAAATTTCAGCGATGGTTTTAACGAAAATGAAGGAAATCGCA 1307
Query 451292 GAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAAT 451351
|| ||||||||| || | || || || || || || ||||| || | |
Sbjct 1308 GAGGCATATATTGGGAAAAAGGTGGAACACGCTGTGATCACAGTGCCGGCTTACTTTACT 1367
Query 451352 GATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGA 451411
||||| |||||||| || || || ||||| ||| || || || |||||||| | ||
Sbjct 1368 GATGCGCAACGGCAGGCTACGAAGGATGCTGGAACGATCGCCGGCCTAAATGTTGTCCGT 1427
Query 451412 ATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAG 451454
||||| || ||||| || || || ||| | || ||||| ||||
Sbjct 1428 ATTATCAACGAACCAACGGCCGCCGCTATCGCTTATGGTCTAG 1470
>seq1065
Length=17194
Score = 96.9 bits (106), Expect = 1e-14
Identities = 100/131 (76%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 451319 GATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGAT 451378
||||| || | || || || || |||||||||||| | || ||||| ||||| ||||||
Sbjct 1474 GATGCGGTGGTCACGGTGCCGGCATATTTCAATGATTCCCAGCGGCAGGCAACGAAAGAT 1533
Query 451379 GCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCT 451438
|| || ||||| || ||||||| || |||||||| ||||| || || || |||||
Sbjct 1534 GCTGGCGCAATTGCGGGCCTAAATGTGCTGCGAATTATAAATGAGCCAACTGCTGCTGCA 1593
Query 451439 CTAGCATATGG 451449
| ||||||||
Sbjct 1594 ATTGCATATGG 1604
>seq23395
Length=3764
Score = 84.2 bits (92), Expect = 9e-11
Identities = 64/75 (85%), Gaps = 2/75 (3%)
Strand=Plus/Plus
Query 509506 GCCTTATTAGCTCAGTTGGATTAGAGCAGCAGGCTTTTAACCTGATGGTCGTGGGTTCGA 509565
||||| ||||||||||||| ||||||| ||| ||||||| |||| ||||| ||||||||
Sbjct 6 GCCTTCTTAGCTCAGTTGG--TAGAGCATCAGACTTTTAATCTGAGGGTCGCGGGTTCGA 63
Query 509566 GTCCCACATAAGGCT 509580
||||| || | ||||
Sbjct 64 GTCCCGCAGAGGGCT 78
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1972468070953308
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |