Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gongylonema_20pulchrum_20[genbank_20GCA_5F000951235.1_202014-09-25] 128,401 sequences; 322,334,493 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq39380 87.8 2e-12 >seq39380 Length=2330 Score = 87.8 bits (96), Expect = 2e-12 Identities = 94/122 (77%), Gaps = 2/122 (2%) Strand=Plus/Minus Query 176895 CACGAACATT-CTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACC 176953 |||||||||| |||| | || ||||| | || || || |||||||| | |||||||| Sbjct 1158 CACGAACATTGCTTA-ATTTGCCACGGATCGGAAAAACCCCGTAGTGTTTTCGACCAACA 1100 Query 176954 ACAGAGAGACCCGCAACCGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTA 177013 |||| || || ||||| || || | |||||||||||| || || || ||||| ||||| Sbjct 1099 ACAGTAAGTCCAGCAACGGCAAGTGCTTTCGCAGAATCTCCTTCCGTAACGATCAGTGTG 1040 Query 177014 CA 177015 || Sbjct 1039 CA 1038 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 619746100688720