Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gongylonema_20pulchrum_20[genbank_20GCA_5F000951235.1_202014-09-25]
128,401 sequences; 322,334,493 total letters
Query= NC_020864.1
Length=205622
Score E
Sequences producing significant alignments: (Bits) Value
seq29780 138 1e-27
seq76917 134 2e-26
seq65209 132 6e-26
seq1065 127 3e-24
seq55198 116 5e-21
seq27460 111 2e-19
seq4775 111 2e-19
seq73431 107 3e-18
seq32511 107 3e-18
seq30912 107 3e-18
seq29835 100 4e-16
seq28200 100 4e-16
seq19432 100 4e-16
seq248 98.7 1e-15
seq82153 95.1 2e-14
seq14519 91.5 2e-13
seq43397 84.2 3e-11
seq41836 84.2 3e-11
>seq29780
Length=3062
Score = 138 bits (152), Expect = 1e-27
Identities = 117/144 (81%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919
||||||| || ||||| ||||| || || || ||||| ||||| || || || ||| |||
Sbjct 649 GTATGCAGATTTTTGTTAAAACTCTGACCGGCAAAACAATCACTCTGGAAGTGGAGCCGT 590
Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979
| ||||| ||||| ||| | || || |||||||| || |||||||||||||| || ||||
Sbjct 589 CCGACACGATCGAGAACGTAAAGGCGAAGATTCAGGACAAGGAAGGCATTCCTCCTGATC 530
Query 171980 AGCAACGACTTATTTTTGCTGGTA 172003
|||| || |||||||| |||||||
Sbjct 529 AGCAGCGTCTTATTTTCGCTGGTA 506
>seq76917
Length=1040
Score = 134 bits (148), Expect = 2e-26
Identities = 116/144 (81%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919
||||||| ||||| ||||| || || ||||| || || ||||| || || || ||| |||
Sbjct 605 GTATGCAGATCTTCGTGAAGACTCTAACTGGCAAGACAATCACACTGGAAGTGGAGGCGT 664
Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979
| ||||| ||||| ||| | || || ||||||||||| ||||| || |||||||| ||||
Sbjct 665 CCGACACGATCGAGAACGTGAAGGCAAAGATTCAAGACAAGGAGGGAATTCCACCGGATC 724
Query 171980 AGCAACGACTTATTTTTGCTGGTA 172003
|||| |||||||| || || ||||
Sbjct 725 AGCAGCGACTTATCTTCGCAGGTA 748
Score = 129 bits (142), Expect = 8e-25
Identities = 115/144 (80%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919
||||||| ||||| ||||| || | || || ||||| ||||| || ||||||||| | |
Sbjct 266 GTATGCAGATCTTCGTGAAGACTTTGACCGGTAAAACCATCACACTGGAGGTTGAGGCAT 325
Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979
| ||||| ||||| ||| | || || |||||||| || || ||||| |||||||| ||||
Sbjct 326 CTGACACCATCGAGAACGTGAAGGCGAAGATTCAGGACAAAGAAGGTATTCCACCGGATC 385
Query 171980 AGCAACGACTTATTTTTGCTGGTA 172003
||||||| ||||| || || ||||
Sbjct 386 AGCAACGGCTTATCTTCGCAGGTA 409
>seq65209
Length=1292
Score = 132 bits (146), Expect = 6e-26
Identities = 169/233 (73%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916
|| ||||||| || || || ||||| | || || || || ||||| || || || |||
Sbjct 692 GTGGTATGCAGATTTTCGTCAAAACGTTGACGGGCAAGACAATCACTCTGGAAGTGGAGG 633
Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976
| || ||||| || || ||| | || || ||||| || || || || || || || || |
Sbjct 632 CATCGGACACCATTGAGAACGTTAAGGCGAAGATCCAGGACAAAGAGGGTATCCCTCCGG 573
Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036
|||||||||| ||||||||||| || || ||| | || || || || || | | ||||
Sbjct 572 ATCAGCAACGTCTTATTTTTGCCGGCAAGCAGTTGGAGGACGGTCGCACTTTGTCGGATT 513
Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089
| ||| | |||||||| || ||| | || || || || | ||||| ||||||
Sbjct 512 ATAACATCCAAAAGGAATCGACTTTGCATCTCGTCCTTCGCCTTCGCGGTGGT 460
Score = 129 bits (142), Expect = 8e-25
Identities = 115/144 (80%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919
|||||||||| || ||||| || || || || || || ||||| | ||||| ||| |||
Sbjct 1102 GTATGCAAATTTTCGTGAAGACTCTCACCGGCAAGACAATCACATTGGAGGTGGAGGCGT 1043
Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979
| ||||| || || ||| |||| || ||||| || || || ||||||||||| || ||||
Sbjct 1042 CCGACACGATTGAAAACGTCAAGGCAAAGATCCAGGACAAAGAAGGCATTCCCCCAGATC 983
Query 171980 AGCAACGACTTATTTTTGCTGGTA 172003
|||| |||||||| ||||||||||
Sbjct 982 AGCAGCGACTTATCTTTGCTGGTA 959
>seq1065
Length=17194
Score = 127 bits (140), Expect = 3e-24
Identities = 196/276 (71%), Gaps = 3/276 (1%)
Strand=Plus/Plus
Query 195575 GTGGCTGATAAGCCTATGATTAATGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCC 195634
||||| | |||||| | | | | || |||| | || |||| ||| ||| | ||
Sbjct 10292 GTGGCGG-TAAGCCAAAGGTGCAGGTGGAATACAAGGGCGAGACGAAGACCTTTACGCCG 10350
Query 195635 GAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGT 195694
|| ||||| || || ||||| |||| |||||||||||||| || || | | | ||||
Sbjct 10351 GAGGAAATCTCCTCGATGGTACTGATCAAGATGAAGGAGACGGCCGAGGCATACTTGGGG 10410
Query 195695 AAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAG 195754
| ||||| |||||||| | || ||||| || ||||||| || ||||||||||||
Sbjct 10411 CGCAAAGTGAAGGATGCAGTGATCACGGTACCAGCCTACTTCAACGACTCACAACGACAG 10470
Query 195755 GCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGT-CTTAGAATTATCAATGAACC 195813
|| || || || || | || || |||| || || ||| || | || || || |||||
Sbjct 10471 GCTACCAAAGATGCGGGCGCAATCTCGGGCCTTAA-TGTGCTGCGTATCATAAACGAACC 10529
Query 195814 AACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAA 195849
|| || ||||| ||||| ||||| ||||||| ||
Sbjct 10530 TACTGCAGCTGCCATTGCGTATGGATTGGACAAAAA 10565
Score = 114 bits (126), Expect = 2e-20
Identities = 188/267 (70%), Gaps = 3/267 (1%)
Strand=Plus/Plus
Query 196600 TCATATTCAAGTATATGAAGGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAA 196658
|||| || | || |||||||| ||||| | | || ||||||| || || | ||||| |
Sbjct 12263 TCATTTT-AGGTTTATGAAGGTGAACG-TGCGATGACAAAGGACAATAATTTGCTTGGCA 12320
Query 196659 CTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCT 196718
|| || | ||||||||||| | || || | || || |||||||| | || |
Sbjct 12321 AATTTGAGCTCTCGGGGATTCCACCAGCGCCTCGTGGAGTGCCACAGATCGAAGTCACTT 12380
Query 196719 TCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAAT 196778
| ||||| |||||||| || || || || ||| |||| ||||||| | |||||||
Sbjct 12381 TTGATATCGACGCAAACGGTATCCTGAATGTCTCAGCACAGGACAAATCAACTGGCAAGC 12440
Query 196779 CTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTA 196838
| |||||| |||||||| || ||||| || | || ||||| ||||| || || |
Sbjct 12441 AAAACAAGATTACTATTACCAACGATAAGGGACGCTTGTCAAAGGATGAAATCGAGCGAA 12500
Query 196839 TGGTTCAAGATGCGGAAAAGTACAGGG 196865
|||| || || || || || |||| ||
Sbjct 12501 TGGTGCAGGAGGCCGAGAAATACAAGG 12527
Score = 109 bits (120), Expect = 7e-19
Identities = 112/144 (78%), Gaps = 2/144 (1%)
Strand=Plus/Plus
Query 195707 GATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGAC 195766
||||| || || || || || || || |||| |||||| || || ||||| || || ||
Sbjct 1474 GATGCGGTGGTCACGGTGCCGGCATATTTCAATGATTCCCAGCGGCAGGCAACGAAAGAT 1533
Query 195767 GCTGCTGCTATTGCGGGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGC 195825
|||| || |||||||| ||||| ||| || ||||||| ||||| ||||| || |||||
Sbjct 1534 GCTGGCGCAATTGCGGGCCTAAA-TGTGCTGCGAATTATAAATGAGCCAACTGCTGCTGC 1592
Query 195826 AATTGCTTATGGTCTGGACAAGAA 195849
|||||| |||||| |||| || ||
Sbjct 1593 AATTGCATATGGTTTGGATAAAAA 1616
Score = 93.3 bits (102), Expect = 6e-14
Identities = 174/256 (68%), Gaps = 0/256 (0%)
Strand=Plus/Plus
Query 196131 TTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTT 196190
|||| || || || ||||| || ||||| || ||||| || | ||| || || || ||||
Sbjct 11456 TTGAAATCGACTCATTGTTCGAGGGAATCGATTTCTACACCAATATCACACGCGCTCGTT 11515
Query 196191 TTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTC 196250
| || || | ||| | ||| | || | | ||||| || || ||| | | ||| |
Sbjct 11516 TCGAGGAACTCAACGCCGATCTCTTCCGCTCGACAATGGATCCGGTGGAAAAGGCACTGC 11575
Query 196251 GTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCC 196310
| ||||| || ||||| || | | || | || || || || || || || || || |
Sbjct 11576 GAGACGCGAAAATGGACAAAGCCCAAGTGCACGATATCGTGCTGGTTGGCGGCTCGACAC 11635
Query 196311 GTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAA 196370
|||| ||||| | || || | ||||| |||||| | || || |||||||||
Sbjct 11636 GTATCCCGAAAGTGCAGAAGCTTCTTTCGGATTTCTTCTCTGGCAAGGAACTAAACAAAA 11695
Query 196371 CGATCAACCCGGATGA 196386
||||||||||||||
Sbjct 11696 GCATCAACCCGGATGA 11711
>seq55198
Length=1598
Score = 116 bits (128), Expect = 5e-21
Identities = 160/224 (71%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 195626 TTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCT 195685
||||| || ||||||||||| | ||||| || | || |||||||| | || || |
Sbjct 1254 TTTGCCCCGGAAGAAATTTCAGCGATGGTTTTAACGAAAATGAAGGAAATCGCAGAGGCA 1313
Query 195686 TTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCA 195745
| || || |||| ||| || | || || | || || || |||||||| | |||| |
Sbjct 1314 TATATTGGGAAAAAGGTGGAACACGCTGTGATCACAGTGCCGGCTTACTTTACTGATGCG 1373
Query 195746 CAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATC 195805
||||| ||||| || ||||| |||| | || || || ||||| | | | ||||||
Sbjct 1374 CAACGGCAGGCTACGAAGGATGCTGGAACGATCGCCGGCCTAAATGTTGTCCGTATTATC 1433
Query 195806 AATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAA 195849
|| |||||||| || || || || ||||||||||| || || ||
Sbjct 1434 AACGAACCAACGGCCGCCGCTATCGCTTATGGTCTAGATAAAAA 1477
>seq27460
Length=3287
Score = 111 bits (122), Expect = 2e-19
Identities = 111/144 (77%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||||||||| ||||| || || || || || || ||||| || ||||| || || ||
Sbjct 2377 ATGCAAATCTTCGTGAAGACGCTAACCGGCAAGACGATCACGCTTGAGGTGGAATCCTCG 2318
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
|| || ||||| || | || | || ||||| || ||||||||||| || || ||||||
Sbjct 2317 GATACCATCGAAAATGTGAAGACAAAAATTCAGGACAAGGAAGGCATCCCGCCGGATCAG 2258
Query 171982 CAACGACTTATTTTTGCTGGTAAA 172005
||||| || || ||||| ||||||
Sbjct 2257 CAACGTCTGATCTTTGCAGGTAAA 2234
>seq4775
Length=9739
Score = 111 bits (122), Expect = 2e-19
Identities = 159/224 (71%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 195626 TTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCT 195685
||||| || || |||||||| | ||||| || | || |||||||| | || ||| |
Sbjct 345 TTTGCCCCGGAGGAAATTTCAGCGATGGTCTTAACGAAAATGAAGGAAATCGCAGAAGCA 286
Query 195686 TTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCA 195745
| || || || | ||| || | || || | || || || || ||||| | |||| |
Sbjct 285 TATATCGGGAAGAAGGTGGAACACGCCGTGATCACAGTGCCGGCATACTTTACTGATGCG 226
Query 195746 CAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATC 195805
||||| ||||| || ||||| |||| | || || || |||||| | | | ||||||
Sbjct 225 CAACGGCAGGCTACGAAGGATGCTGGAACGATCGCCGGCCTAAACGTTGTCCGTATTATC 166
Query 195806 AATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAA 195849
|| |||||||| || || || || ||||||||||| || || ||
Sbjct 165 AACGAACCAACGGCCGCCGCTATCGCTTATGGTCTAGATAAAAA 122
>seq73431
Length=1108
Score = 107 bits (118), Expect = 3e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
|||||||| || || ||||| | || || || || ||||| | || || || ||||
Sbjct 566 ATGCAAATTTTCGTCAAAACTTTGACAGGGAAGACGATCACTTTTGAAGTGGAAGCGTCG 507
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
|| || ||||| | | |||| || ||||| || | || |||||||| || || ||||||
Sbjct 506 GATACGATCGAAAGCGTCAAGGCGAAGATCCAGCACAAAGAAGGCATCCCCCCAGATCAG 447
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
|| | | ||||||||||| || ||| | ||||| || || || || | ||||| |||
Sbjct 446 CAGAGCTTAATTTTTGCTGGCAAGCAGTTGGAAGACGGTCGCACTCTATCGGATTATAAC 387
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCT 172073
| || || |||| || |||| || || ||
Sbjct 386 ATCCAGGAGAAGTCGACCTTACATCTCGTCCT 355
>seq32511
Length=2827
Score = 107 bits (118), Expect = 3e-18
Identities = 110/143 (77%), Gaps = 2/143 (1%)
Strand=Plus/Minus
Query 171863 TGCAAATCTTTGTGAAAA--CCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTC 171920
|||| || || |||| || | || ||||| || || ||||| ||| | ||| || |
Sbjct 2352 TGCAGATTTTCGTGACAATTCGCTCACTGGTAAGACAATCACTTCTGAGTTAGAGGCGCC 2293
Query 171921 AGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCA 171980
| ||| | || || || |||| |||||||||||||||||||| ||||| ||| ||| |
Sbjct 2292 GGGCACCGTTGAGAATATGAAAGTCAAGATTCAAGATAAGGAAGACATTCTACCAGATTA 2233
Query 171981 GCAACGACTTATTTTTGCTGGTA 172003
|||||| ||||||||||||||||
Sbjct 2232 GCAACGGCTTATTTTTGCTGGTA 2210
Score = 84.2 bits (92), Expect = 3e-11
Identities = 105/144 (73%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919
||| | ||||||| | ||| | | | || || | ||||| || ||| |||| | |
Sbjct 2064 GTACGTAAATCTTAGGGAAGGCTGTGATCGGTAAGAACATCACACTGGAGATTGAATTAT 2005
Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979
| ||||| ||||| ||| | || | |||||||| | ||||| ||||||||||| ||||
Sbjct 2004 CTGACACCATCGAGAACGTTAAGGTAAAGATTCAGGGCAAGGAGGGCATTCCACCGGATC 1945
Query 171980 AGCAACGACTTATTTTTGCTGGTA 172003
||||||| ||||| || | ||||
Sbjct 1944 AGCAACGGCTTATCTTCACAGGTA 1921
>seq30912
Length=2956
Score = 107 bits (118), Expect = 3e-18
Identities = 110/143 (77%), Gaps = 2/143 (1%)
Strand=Plus/Minus
Query 171863 TGCAAATCTTTGTGAAAA--CCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTC 171920
|||| || || |||| || | || ||||| || || ||||| ||| | ||| || |
Sbjct 2325 TGCAGATTTTCGTGACAATTCGCTCACTGGTAAGACAATCACTTCTGAGTTAGAGGCGCC 2266
Query 171921 AGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCA 171980
| ||| | || || || |||| |||||||||||||||||||| ||||| ||| ||| |
Sbjct 2265 GGGCACCGTTGAGAATATGAAAGTCAAGATTCAAGATAAGGAAGACATTCTACCAGATTA 2206
Query 171981 GCAACGACTTATTTTTGCTGGTA 172003
|||||| ||||||||||||||||
Sbjct 2205 GCAACGGCTTATTTTTGCTGGTA 2183
>seq29835
Length=3057
Score = 100 bits (110), Expect = 4e-16
Identities = 109/142 (77%), Gaps = 2/142 (1%)
Strand=Plus/Plus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTT-GAGTCGTC 171920
||||| || ||||||| ||| || ||||| |||| ||||| || ||||| ||| | ||
Sbjct 931 ATGCAGATTTTTGTGAGAACGCTCACTGGCAAAATGATCACTCTAGAGGTGAGAG-CATC 989
Query 171921 AGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCA 171980
|||||||| || || | || || | ||| ||||||||||||||||| |||| ||||
Sbjct 990 GGACACAATTGAGAATGTGAAGGCGATGATCCAAGATAAGGAAGGCATACCACTGAATCA 1049
Query 171981 GCAACGACTTATTTTTGCTGGT 172002
||| || || |||| ||||||
Sbjct 1050 GCAGCGCCTCTTTTTCGCTGGT 1071
>seq28200
Length=3211
Score = 100 bits (110), Expect = 4e-16
Identities = 109/142 (77%), Gaps = 2/142 (1%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTT-GAGTCGTC 171920
||||| || ||||||| ||| || ||||| |||| ||||| || ||||| ||| | ||
Sbjct 1923 ATGCAGATTTTTGTGAGAACGCTCACTGGCAAAATGATCACTCTAGAGGTGAGAG-CATC 1865
Query 171921 AGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCA 171980
|||||||| || || | || || | ||| ||||||||||||||||| |||| ||||
Sbjct 1864 GGACACAATTGAGAATGTGAAGGCGATGATCCAAGATAAGGAAGGCATACCACTGAATCA 1805
Query 171981 GCAACGACTTATTTTTGCTGGT 172002
||| || || |||| ||||||
Sbjct 1804 GCAGCGCCTCTTTTTCGCTGGT 1783
>seq19432
Length=4349
Score = 100 bits (110), Expect = 4e-16
Identities = 97/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| || | ||||||||| || ||||| ||||| ||||| || ||||| ||| | ||
Sbjct 2056 ATGCAGATTTATGTGAAAACGCTCACTGGCAAAACGATCACTCTGGAGGTGGAGGCATCG 1997
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
|| || || || || | || || ||||| || || ||||||||||| ||||| ||||||
Sbjct 1996 GATACCATTGAGAATGTGAAGGCAAAGATCCAGGACAAGGAAGGCATACCACCGGATCAG 1937
Query 171982 CAACG 171986
|| ||
Sbjct 1936 CAGCG 1932
>seq248
Length=25315
Score = 98.7 bits (108), Expect = 1e-15
Identities = 75/89 (84%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 79238 AGAAACAGTCTTCTCGTAGCACCAATGCCCACTGCTTCGACGGCTCAGATCCTCGGTAAT 79297
|||||||| || || | || ||||||||||| |||||||| || ||||| ||||| |||
Sbjct 359 AGAAACAGCCTACTGCTTGCGCCAATGCCCACAGCTTCGACCGCACAGATTCTCGGCAAT 418
Query 79298 AATGAGTGTTTTGAACCATACACTACAAA 79326
|| ||| |||||||||| |||||||||||
Sbjct 419 AACGAGAGTTTTGAACCGTACACTACAAA 447
>seq82153
Length=950
Score = 95.1 bits (104), Expect = 2e-14
Identities = 102/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919
||||| ||| ||||| |||| ||||| || ||||| ||| || || || ||| |||
Sbjct 799 GTATGTCAATTTTTGTTAAAAGTCTTACCGGCAAAACAATCGTTCTGGAAGTGGAGCCGT 740
Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979
| ||||| | || | | ||||| |||||||| || |||||||||||||| || ||||
Sbjct 739 CTGACACGACCGTGGATGTAAAAGCGAAGATTCAGGAAAAGGAAGGCATTCCTCCTGATC 680
Query 171980 AGCAACGACTTATTT 171994
|||| || ||||||
Sbjct 679 AGCAGCGTTTTATTT 665
>seq14519
Length=5345
Score = 91.5 bits (100), Expect = 2e-13
Identities = 94/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Plus
Query 171880 ACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATC 171939
||||| || |||||||| ||||| || || || ||| | || || || ||||| || |
Sbjct 1286 ACCCTCACCGGAAAAACGATCACTCTGGAAGTGGAGGCCTCGGATACCATCGAGAATGTG 1345
Query 171940 AAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCT 171999
||||| ||||| ||||||||||| || || ||||| || || || || || || || |||
Sbjct 1346 AAAGCGAAGATACAAGATAAGGAGGGAATCCCACCAGACCAACAGCGTCTCATCTTCGCT 1405
Query 172000 GGT 172002
|||
Sbjct 1406 GGT 1408
Score = 84.2 bits (92), Expect = 3e-11
Identities = 93/124 (75%), Gaps = 0/124 (0%)
Strand=Plus/Plus
Query 171879 AACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACAT 171938
||| || || || ||||| ||||| || || || ||| | || || || ||||| || |
Sbjct 2523 AACTCTCACCGGTAAAACGATCACTCTGGAAGTGGAGGCCTCGGATACCATCGAGAATGT 2582
Query 171939 CAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGC 171998
|| || ||||| ||||||||||| || || ||||| ||||| || || || || || ||
Sbjct 2583 GAAGGCGAAGATACAAGATAAGGAGGGAATCCCACCAGATCAACAGCGTCTCATCTTCGC 2642
Query 171999 TGGT 172002
||||
Sbjct 2643 TGGT 2646
>seq43397
Length=2103
Score = 84.2 bits (92), Expect = 3e-11
Identities = 176/257 (68%), Gaps = 4/257 (2%)
Strand=Plus/Plus
Query 196605 TTCAAGTATATGAAGGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAACTTTC 196663
|||| ||||||||||||||||| || || | || || || || | | || | ||
Sbjct 1757 TTCAGGTATATGAAGGAGAACG-ACCAATGACCAAAGACAATCACATTTTGGGCAAATTT 1815
Query 196664 GATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGAT 196723
|||||||| || || ||| | ||||| | ||||| ||||||||| | || |||||
Sbjct 1816 GATTTGACCGGCATCCCACCAGCACCTCGTGGTGTACCACAGATTGAGGTCACATTCGAA 1875
Query 196724 ATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAA 196783
|| || | ||||| ||| | | || || ||||| || |||| ||||| ||| |||
Sbjct 1876 ATCGATGTCAATGGCATTTTGCATGTTACGGCTGAAGATAAGGGCACTGGC-AATAAGAA 1934
Query 196784 -AAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGT 196842
||||| || || ||||| | ||| | ||| ||| || || ||| | ||| |
Sbjct 1935 TAAGATAACAATCACAAATGATCATAACCGGTTGTCTCCGGAAGATATCGAAAGGATGAT 1994
Query 196843 TCAAGATGCGGAAAAGT 196859
| | ||||| || ||||
Sbjct 1995 TAACGATGCCGAGAAGT 2011
>seq41836
Length=2186
Score = 84.2 bits (92), Expect = 3e-11
Identities = 176/257 (68%), Gaps = 4/257 (2%)
Strand=Plus/Minus
Query 196605 TTCAAGTATATGAAGGAGAACGCTCCCGTG-CAAAGGATAACCATCTACTTGGAACTTTC 196663
|||| ||||||||||||||||| || || | || || || || | | || | ||
Sbjct 348 TTCAGGTATATGAAGGAGAACG-ACCAATGACCAAAGACAATCACATTTTGGGCAAATTT 290
Query 196664 GATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGAT 196723
|||||||| || || ||| | ||||| | ||||| ||||||||| | || |||||
Sbjct 289 GATTTGACCGGCATCCCACCAGCACCTCGTGGTGTACCACAGATTGAGGTCACATTCGAA 230
Query 196724 ATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAA 196783
|| || | ||||| ||| | | || || ||||| || |||| ||||| ||| |||
Sbjct 229 ATCGATGTCAATGGCATTTTGCATGTTACGGCTGAAGATAAGGGCACTGGC-AATAAGAA 171
Query 196784 -AAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGT 196842
||||| || || ||||| | ||| | ||| ||| || || ||| | ||| |
Sbjct 170 TAAGATAACAATCACAAATGATCATAACCGGTTGTCTCCGGAAGATATCGAAAGGATGAT 111
Query 196843 TCAAGATGCGGAAAAGT 196859
| | ||||| || ||||
Sbjct 110 TAACGATGCCGAGAAGT 94
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 656806522624720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |