Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gongylonema_20pulchrum_20[genbank_20GCA_5F000951235.1_202014-09-25] 128,401 sequences; 322,334,493 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq56994 93.3 1e-13 >seq56994 Length=1537 Score = 93.3 bits (102), Expect = 1e-13 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 302553 ATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGT 302612 ||||||| | ||||| ||||||| ||||||| ||||||||| || ||||| || Sbjct 179 ATCATAATTGACCATAACACTTTCCATAGCTTTGATTAGACGACGCTGGATGTAACCTGT 238 Query 302613 TGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAA 302672 | | ||| || || ||||||||||| ||||| |||| |||||||| |||||||| || Sbjct 239 TTCGGCTGTCTTCACTGCTGTATCAATAAGACCTTCACGGCCACCCATCGCATGGAAAAA 298 Query 302673 TAGCTC 302678 | ||| Sbjct 299 GAACTC 304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1469396257213137