Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gongylonema_20pulchrum_20[genbank_20GCA_5F000951235.1_202014-09-25]
128,401 sequences; 322,334,493 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq21874 102 1e-15
seq76804 98.7 1e-14
>seq21874
Length=3970
Score = 102 bits (112), Expect = 1e-15
Identities = 121/164 (74%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407
|||| ||||| ||| || || |||||||| || ||||| || |||| || |||
Sbjct 3787 GCCAACTCGCCTGGCAAAATGAGACGCACGGCAGTTTGGATTTCACGCGATGAAATGGTG 3728
Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467
|| ||||| | || ||||| || | ||| |||| |||| || |||| || ||||
Sbjct 3727 GAACGTTTGTTGTACTGTGCCAGGCGACTGGCTTCGGCAGCGATACGCTCGAACACGTCG 3668
Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCC 1254511
||||||||||||||||||| |||||||| ||| ||||||||
Sbjct 3667 TTGACAAACGAGTTCATGATCGACATCGCCTTCGACGAGATGCC 3624
>seq76804
Length=1042
Score = 98.7 bits (108), Expect = 1e-14
Identities = 153/217 (71%), Gaps = 4/217 (2%)
Strand=Plus/Minus
Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407
|||| |||||| | | ||||| ||||| || ||||| || || |||| ||| ||
Sbjct 243 GCCAACTCGCCGGGAAGAATCAGACGCACAGCAGTCTGAATTTCACGCGA--CGAAATTG 186
Query 1254408 TTG--CGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465
||| |||||||| | ||||||||||| | ||||| | | | || |||| | ||
Sbjct 185 TTGAGCGCTTGTTGTAATGCGCCAGACGACTCGCCTCAGCAGCCAGTCGTTCGAAAACGT 126
Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525
|||| ||||| |||||||| | ||||| | ||| || ||||| ||| || || |
Sbjct 125 CGTTCACAAAAGAGTTCATTATTGACATGGCCTTTGACGAAATGCCTGTGTCCGGATGAA 66
Query 1254526 CCTGCTTGAGCACCTTGTAGATGAACGACGAGTACGA 1254562
||||||| | ||| ||||||| || |||||| ||
Sbjct 65 CCTGCTTCAACACGCGGTAGATGTACACCGAGTAGGA 29
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6096602012638117
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |