Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gongylonema_20pulchrum_20[genbank_20GCA_5F000951235.1_202014-09-25] 128,401 sequences; 322,334,493 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq27460 105 7e-18 seq29780 95.1 1e-14 seq65209 87.8 2e-12 >seq27460 Length=3287 Score = 105 bits (116), Expect = 7e-18 Identities = 112/148 (76%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 137268 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTT 137327 |||||| ||| ||||||||||||||||||| || || |||||||| ||||| |||||| Sbjct 2234 TTTACCTGCAAAGATCAGACGTTGCTGATCCGGCGGGATGCCTTCCTTGTCCTGAATTTT 2293 Query 137328 TTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGT 137387 | || | | ||| | || || | || ||| || |||| || | |||||||||||| Sbjct 2294 TGTCTTCACATTTTCGATGGTATCCGAGGATTCCACCTCAAGCGTGATCGTCTTGCCGGT 2353 Query 137388 CAATGTTTTTACGAATATTTGCATAGCT 137415 | || || ||||| |||||||| ||| Sbjct 2354 TAGCGTCTTCACGAAGATTTGCATGGCT 2381 >seq29780 Length=3062 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 || || ||||| |||||||| ||||| | |||| |||||| || || || || Sbjct 36 GTCGACTCTTTCTGTATGTTATAATCCGATAGAGTGCGACCGTCTTCCAGCTGCTTGCCG 95 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334 ||| | || | || |||||||| || || |||||||||||||| || || || Sbjct 96 GCAAAAATTAAGCGCTGCTGATCTGGGGGGATGCCTTCTTTGTCCTGGATCTTCGCCTTG 155 Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394 | | ||| | ||| || | | ||| ||||| | ||| | |||||| || ||||| ||| Sbjct 156 ACGTTTTCGATCGTATCCGACGCTTCCACTTCCAAAGTGATCGTCTTCCCCGTCAAAGTT 215 Query 137395 TTTACGAATATTTGCAT 137411 || ||||| |||||||| Sbjct 216 TTGACGAAAATTTGCAT 232 >seq65209 Length=1292 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 || ||||| ||||| ||||| ||||| || |||| ||| || | || || || Sbjct 491 GTCGATTCCTTTTGGATGTTATAATCCGACAAAGTGCGACCGTCCTCCAACTGCTTGCCG 550 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334 ||| | || |||||||||||||| ||||| || || |||||||| || || || Sbjct 551 GCAAAAATAAGACGTTGCTGATCCGGAGGGATACCCTCTTTGTCCTGGATCTTCGCCTTA 610 Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394 | | || | ||||| | | || ||||| | ||| | |||||||| ||||| ||| Sbjct 611 ACGTTCTCAATGGTGTCCGATGCCTCCACTTCCAGAGTGATTGTCTTGCCCGTCAACGTT 670 Query 137395 TTTACGAATATTTGCATA 137412 || ||||| || |||||| Sbjct 671 TTGACGAAAATCTGCATA 688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 487759880773200