Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gongylonema_20pulchrum_20[genbank_20GCA_5F000951235.1_202014-09-25]
128,401 sequences; 322,334,493 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq65209 102 5e-17
seq29780 98.7 7e-16
>seq65209
Length=1292
Score = 102 bits (112), Expect = 5e-17
Identities = 140/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618
|| ||||| ||||| ||||| || | ||||| |||| ||||| || || |||||||||
Sbjct 497 TCCTTTTGGATGTTATAATCCGACAAAGTGCGACCGTCCTCCAACTGCTTGCCGGCAAAA 556
Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678
|| | ||| |||||||| | || | ||| |||||||| || ||| | | ||| |
Sbjct 557 ATAAGACGTTGCTGATCCGGAGGGATACCCTCTTTGTCCTGGATCTTC-GCCTTAACGTT 615
Query 33679 GTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737
|| | |||||| || ||||| || | ||||| || || || || |||||||| ||
Sbjct 616 CTCAATGGTGTCCGATGCCTCCACTTCCAGAGTGATTGTCTTGCCCGTCAACGTTTTGAC 675
Query 33738 AAAGATCTGCATA 33750
|| |||||||||
Sbjct 676 GAAAATCTGCATA 688
>seq29780
Length=3062
Score = 98.7 bits (108), Expect = 7e-16
Identities = 139/193 (72%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 33558 CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617
|||||| |||||||| ||||| || || ||||| |||| |||| || || ||||||||
Sbjct 41 CTCTTTCTGTATGTTATAATCCGATAGAGTGCGACCGTCTTCCAGCTGCTTGCCGGCAAA 100
Query 33618 AATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACAT 33677
||| || |||||||||||| | || | ||||||||||| || ||| | | || |
Sbjct 101 AATTAAGCGCTGCTGATCTGGGGGGATGCCTTCTTTGTCCTGGATCTTC-GCCTTGACGT 159
Query 33678 AGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTA 33736
|| | || || | |||||| || | |||||||| || || || || ||||| |
Sbjct 160 TTTCGATCGTATCCGACGCTTCCACTTCCAAAGTGATCGTCTTCCCCGTCAAAGTTTTGA 219
Query 33737 CAAAGATCTGCAT 33749
| || || |||||
Sbjct 220 CGAAAATTTGCAT 232
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328189615321920
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |