Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gongylonema_20pulchrum_20[genbank_20GCA_5F000951235.1_202014-09-25] 128,401 sequences; 322,334,493 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq65209 93.3 1e-13 seq29780 91.5 3e-13 >seq65209 Length=1292 Score = 93.3 bits (102), Expect = 1e-13 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||||||| | || || || || |||||| |||||||||| || ||| Sbjct 684 CAGATTTTCGTCAAAACGTTGACGGGCAAGACAATCACTCTGGAAGTGGAGGCATCGGAC 625 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| ||||| || || ||||| || || ||||| ||| Sbjct 624 ACCATTGAGAACGTTAAGGCGAAGATCCAGGACAAAGAGGGTATCCCTCCGGATCAGCAA 565 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | ||||| || ||||| ||||||||||| || || | |||||| | ||||| ||| || Sbjct 564 CGTCTTATTTTTGCCGGCAAGCAGTTGGAGGACGGTCGCACTTTGTCGGATTATAACATC 505 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 || || || || ||| | || || || Sbjct 504 CAAAAGGAATCGACTTTGCATCTCGT 479 >seq29780 Length=3062 Score = 91.5 bits (100), Expect = 3e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 |||||| | || || || ||||||||||||||||||||| || || || ||||| Sbjct 218 CAAAACTTTGACGGGGAAGACGATCACTTTGGAAGTGGAAGCGTCGGATACGATCGAAAA 159 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||| || || |||||||| || || || || | | || || Sbjct 158 CGTCAAGGCGAAGATCCAGGACAAAGAAGGCATCCCCCCAGATCAGCAGCGCTTAATTTT 99 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||||| |||||| ||||||| || | ||| | | ||||| ||| | ||||||||||| Sbjct 98 TGCCGGCAAGCAGCTGGAAGACGGTCGCACTCTATCGGATTATAACATACAGAAAGAGTC 39 Query 206364 TACTCTTCACCTTGT 206378 ||| | || || || Sbjct 38 GACTTTGCATCTCGT 24 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179876541914321