Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gongylonema_20pulchrum_20[genbank_20GCA_5F000951235.1_202014-09-25]
128,401 sequences; 322,334,493 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq65209 93.3 1e-13
seq29780 91.5 3e-13
>seq65209
Length=1292
Score = 93.3 bits (102), Expect = 1e-13
Identities = 144/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||||||| | || || || || |||||| |||||||||| || |||
Sbjct 684 CAGATTTTCGTCAAAACGTTGACGGGCAAGACAATCACTCTGGAAGTGGAGGCATCGGAC 625
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | || || ||| ||||| || || ||||| || || ||||| |||
Sbjct 624 ACCATTGAGAACGTTAAGGCGAAGATCCAGGACAAAGAGGGTATCCCTCCGGATCAGCAA 565
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| ||||| || ||||| ||||||||||| || || | |||||| | ||||| ||| ||
Sbjct 564 CGTCTTATTTTTGCCGGCAAGCAGTTGGAGGACGGTCGCACTTTGTCGGATTATAACATC 505
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378
|| || || || ||| | || || ||
Sbjct 504 CAAAAGGAATCGACTTTGCATCTCGT 479
>seq29780
Length=3062
Score = 91.5 bits (100), Expect = 3e-13
Identities = 137/195 (70%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
|||||| | || || || ||||||||||||||||||||| || || || |||||
Sbjct 218 CAAAACTTTGACGGGGAAGACGATCACTTTGGAAGTGGAAGCGTCGGATACGATCGAAAA 159
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||| ||||| || || |||||||| || || || || | | || ||
Sbjct 158 CGTCAAGGCGAAGATCCAGGACAAAGAAGGCATCCCCCCAGATCAGCAGCGCTTAATTTT 99
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
||||| |||||| ||||||| || | ||| | | ||||| ||| | |||||||||||
Sbjct 98 TGCCGGCAAGCAGCTGGAAGACGGTCGCACTCTATCGGATTATAACATACAGAAAGAGTC 39
Query 206364 TACTCTTCACCTTGT 206378
||| | || || ||
Sbjct 38 GACTTTGCATCTCGT 24
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179876541914321
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |