Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gongylonema_20pulchrum_20[genbank_20GCA_5F000951235.1_202014-09-25]
128,401 sequences; 322,334,493 total letters
Query= NC_026141.2
Length=4988
Score E
Sequences producing significant alignments: (Bits) Value
seq41068 86.0 2e-13
seq29814 80.6 8e-12
seq28565 80.6 8e-12
>seq41068
Length=2228
Score = 86.0 bits (94), Expect = 2e-13
Identities = 53/57 (93%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832
||||||||| |||||||| |||||||||||||||||||||| ||||||||| |||||
Sbjct 714 TAGCTCAGTCGGGAGAGCGTTAGACTGAAGATCTAAAGGTCGCTGGTTCAATCCCGG 658
>seq29814
Length=3059
Score = 80.6 bits (88), Expect = 8e-12
Identities = 52/57 (91%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832
||||||||| |||||||| |||||||||||||||||||||| | ||||||| |||||
Sbjct 1959 TAGCTCAGTCGGGAGAGCGTTAGACTGAAGATCTAAAGGTCGCCGGTTCAATCCCGG 2015
>seq28565
Length=3173
Score = 80.6 bits (88), Expect = 8e-12
Identities = 52/57 (91%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832
||||||||| |||||||| |||||||||||||||||||||| | ||||||| |||||
Sbjct 2066 TAGCTCAGTCGGGAGAGCGTTAGACTGAAGATCTAAAGGTCGCCGGTTCAATCCCGG 2122
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15827341044645
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |