Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gongylonema_20pulchrum_20[genbank_20GCA_5F000951235.1_202014-09-25]
128,401 sequences; 322,334,493 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq65209 104 1e-17
seq29780 96.9 2e-15
>seq65209
Length=1292
Score = 104 bits (114), Expect = 1e-17
Identities = 142/194 (73%), Gaps = 6/194 (3%)
Strand=Plus/Plus
Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575
|||||||| ||||||||||| || | || || |||| || | || || ||||||||
Sbjct 497 TCCTTTTGGATGTTATAATCCGACAAAGTGCGACCGTCCTCCAACTGCTTGCCGGCAAAA 556
Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635
|| | ||| || || ||||| || | ||||| ||||| |||| || | |||||| |
Sbjct 557 ATAAGACGTTGCTGATCCGGAGGGATACCCTCTTTGTCCTGGATC-TTCGCCTTAACGTT 615
Query 34636 -AAAATTGTGTCTTCGCT--CTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTC 34692
||| ||||| || | ||||||||||| || || || || || || ||||||||
Sbjct 616 CTCAATGGTGTC--CGATGCCTCCACTTCCAGAGTGATTGTCTTGCCCGTCAACGTTTTG 673
Query 34693 ACAAAAATCTGCAT 34706
|| |||||||||||
Sbjct 674 ACGAAAATCTGCAT 687
>seq29780
Length=3062
Score = 96.9 bits (106), Expect = 2e-15
Identities = 163/231 (71%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| || | ||| || | || | ||| | ||| ||| || || ||||||||||| ||
Sbjct 5 GCCACCGCGAAGGCGAAGGACGAGATGCAAAGTCGACTCTTTCTGTATGTTATAATCCGA 64
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
|| || || ||||||| || || || |||||||| ||||| ||||| || || || ||
Sbjct 65 TAGAGTGCGACCGTCTTCCAGCTGCTTGCCGGCAAAAATTAAGCGCTGCTGATCTGGGGG 124
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACG-ATAAAATTGTGT-CTTCGCTCTCC 34656
| || || ||||| |||| || | || ||| | || || | | |||| |||
Sbjct 125 GATGCCTTCTTTGTCCTGGATC-TTCGCCTTGACGTTTTCGATCGTATCCGACGCT-TCC 182
Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
||||||| || ||||| || || || || ||||| || ||||| ||||||
Sbjct 183 ACTTCCAAAGTGATCGTCTTCCCCGTCAAAGTTTTGACGAAAATTTGCATG 233
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314237083681433
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |