Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemonchus_20contortus_20[genbank_20GCA_5F000469685.1_202013-08-27] 12,915 sequences; 319,757,902 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq12525 91.5 1e-13 >seq12525 Length=97329 Score = 91.5 bits (100), Expect = 1e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 131126 GGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185 ||||||||||| | ||| ||| | | ||||||| ||| |||| ||||| | || || Sbjct 64034 GGATTCCTTCTCTATCGTAGATGTGTTTCTTGAGCGTCTCAACAGAATCGGACGGCTGGA 63975 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 ||||| | || ||| ||||| ||||||||||| ||||||||||||||| Sbjct 63974 CGTCGAGAGCAATGGTCTTACCAGTTAGAGTTTTGACGAAAATCTGCATG 63925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471936599433600