Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Haemonchus_20contortus_20[genbank_20GCA_5F000469685.1_202013-08-27]
12,915 sequences; 319,757,902 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq8832 132 9e-26
seq8587 127 4e-24
seq8275 125 1e-23
seq8131 113 8e-20
seq8716 109 1e-18
seq12057 86.0 1e-11
seq11992 86.0 1e-11
seq11403 86.0 1e-11
seq11220 86.0 1e-11
seq11096 86.0 1e-11
seq10502 86.0 1e-11
seq9788 86.0 1e-11
seq8873 86.0 1e-11
seq7329 86.0 1e-11
seq5408 86.0 1e-11
seq4018 86.0 1e-11
seq2225 86.0 1e-11
>seq8832
Length=33236
Score = 132 bits (146), Expect = 9e-26
Identities = 114/141 (81%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381
|| || || ||||||| || ||||| || ||||| ||||||||||| || ||||| |||
Sbjct 22394 CCAGCAAAGATGAGTCGCTGCTGGTCTGGGGGAATTCCTTCCTTGTCCTGGATCTTGGCC 22453
Query 68382 TTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441
|| ||| |||||||| || | | ||| ||||| | ||||||||| ||||| ||||||
Sbjct 22454 TTCACGTTTTCGATGGTATCGGAAGCTTCGACTTCGAGGGTGATGGTCTTTCCAGTGAGG 22513
Query 68442 GTCTTGACGAATATCTGCATT 68462
||||||||||| |||||||||
Sbjct 22514 GTCTTGACGAAGATCTGCATT 22534
Score = 120 bits (132), Expect = 6e-22
Identities = 111/141 (79%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381
|| ||||| || | || ||| || || || ||||| ||||| || || || ||||| |||
Sbjct 22986 CCAGCGAAGATCAATCGTTGCTGATCTGGGGGAATTCCTTCTTTATCCTGGATCTTGGCC 23045
Query 68382 TTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441
|||||| ||||||||||| | | ||| ||||| | |||||| || ||||| ||||||
Sbjct 23046 TTGACGTTTTCGATGGTGTCCGAAGCTTCGACTTCAAGGGTGATTGTCTTTCCAGTGAGG 23105
Query 68442 GTCTTGACGAATATCTGCATT 68462
|||||||| || |||||||||
Sbjct 23106 GTCTTGACAAAGATCTGCATT 23126
Score = 120 bits (132), Expect = 6e-22
Identities = 111/141 (79%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381
|| ||||| || | || || ||||| || ||||| || || ||||| |||||||| |||
Sbjct 23583 CCTGCGAAGATCAATCGCTGCTGGTCTGGGGGAATCCCCTCTTTGTCCTGAATCTTGGCC 23642
Query 68382 TTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441
|||||| ||||||||| || | | || ||||| | ||||||||| || || ||||||
Sbjct 23643 TTGACGTTCTCGATGGTATCGGAAGCCTCAACTTCGAGGGTGATGGTCTTGCCAGTGAGG 23702
Query 68442 GTCTTGACGAATATCTGCATT 68462
||||| ||||| |||||||||
Sbjct 23703 GTCTTAACGAAGATCTGCATT 23723
Score = 111 bits (122), Expect = 3e-19
Identities = 109/141 (77%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381
|| ||||| || |||| || || || || ||||| ||||||||||| || ||||| |||
Sbjct 23876 CCAGCGAAGATCAGTCGCTGCTGATCTGGGGGAATTCCTTCCTTGTCCTGGATCTTGGCC 23935
Query 68382 TTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441
|| || || || || || | | ||| ||||| | ||||||||| ||||| ||||||
Sbjct 23936 TTCACATTTTCAATAGTATCCGAGGCTTCGACTTCGAGGGTGATGGTCTTTCCAGTGAGG 23995
Query 68442 GTCTTGACGAATATCTGCATT 68462
||||| ||||| |||||||||
Sbjct 23996 GTCTTAACGAAGATCTGCATT 24016
Score = 105 bits (116), Expect = 1e-17
Identities = 108/141 (77%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381
|| ||||| || | | || || ||||| ||||||||||| ||||| || ||||| |||
Sbjct 22689 CCAGCGAAGATCAAACGCTGCTGATCGGGAGGAATGCCTTCTTTGTCCTGGATCTTGGCC 22748
Query 68382 TTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441
|| || || ||||| || | | || ||||| | ||||||||| || || ||||||
Sbjct 22749 TTCACATTTTCAATGGTATCGGAAGCCTCAACTTCGAGGGTGATGGTCTTGCCAGTGAGG 22808
Query 68442 GTCTTGACGAATATCTGCATT 68462
||||||||||| |||||||||
Sbjct 22809 GTCTTGACGAAGATCTGCATT 22829
Score = 105 bits (116), Expect = 1e-17
Identities = 108/141 (77%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381
|| || || || | || ||| || || || ||||| ||||||||||| || ||||| |||
Sbjct 24170 CCAGCAAAGATCAATCGTTGCTGATCTGGGGGAATTCCTTCCTTGTCCTGGATCTTGGCC 24229
Query 68382 TTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441
|| || || || || || | | ||| ||||| | ||||||||| ||||| ||||||
Sbjct 24230 TTCACATTTTCAATAGTATCCGAGGCTTCGACTTCGAGGGTGATGGTCTTTCCAGTGAGG 24289
Query 68442 GTCTTGACGAATATCTGCATT 68462
||||| ||||| |||||||||
Sbjct 24290 GTCTTAACGAAGATCTGCATT 24310
Score = 102 bits (112), Expect = 2e-16
Identities = 107/141 (76%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381
|| || || || | || || ||||| |||||||| |||||||| || ||||| || |||
Sbjct 23287 CCAGCAAAGATCAATCGCTGCTGGTCTGGTGGAATTCCTTCCTTATCCTGAATTTTGGCC 23346
Query 68382 TTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441
|| || |||||||| || | || ||| ||||| | ||||| || ||||| || ||
Sbjct 23347 TTTACATTTTCGATGGTATCGGATGCTTCAACTTCGAGAGTGATCGTCTTTCCAGTAAGA 23406
Query 68442 GTCTTGACGAATATCTGCATT 68462
||||||||||| || ||||||
Sbjct 23407 GTCTTGACGAAGATTTGCATT 23427
Score = 102 bits (112), Expect = 2e-16
Identities = 110/146 (75%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381
|| ||||| || |||| ||| || || || ||||| || ||||||||||||||||| ||
Sbjct 24478 CCTGCGAAGATCAGTCGTTGCTGATCTGGGGGAATTCCCTCCTTGTCTTGAATCTTGGCT 24537
Query 68382 TTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441
|| || || |||||||| | | ||| ||||| | || || || ||||| || ||
Sbjct 24538 TTAACATTTTCAATGGTGTCAGAAGCTTCGACTTCAAGTGTAATAGTCTTTCCTGTCAGA 24597
Query 68442 GTCTTGACGAATATCTGCATTATGCT 68467
|| |||||||| |||||||| ||||
Sbjct 24598 GTTTTGACGAAAATCTGCATAGTGCT 24623
>seq8587
Length=192155
Score = 127 bits (140), Expect = 4e-24
Identities = 112/140 (80%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381
|| || || || |||| || ||||| || ||||| |||||||||||||||||||| ||
Sbjct 139693 CCAGCAAAGATCAGTCGCTGCTGGTCCGGGGGAATTCCTTCCTTGTCTTGAATCTTGGCT 139752
Query 68382 TTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441
|| ||| ||||||||| || | | || ||||| | ||||||||| || || ||||||
Sbjct 139753 TTCACGTTCTCGATGGTATCAGAAGCCTCAACTTCGAGGGTGATGGTCTTGCCAGTGAGG 139812
Query 68442 GTCTTGACGAATATCTGCAT 68461
||||||||||| ||||||||
Sbjct 139813 GTCTTGACGAAGATCTGCAT 139832
Score = 114 bits (126), Expect = 2e-20
Identities = 110/141 (78%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381
|| ||||| || | || ||| || || || ||||| ||||| || || || ||||| |||
Sbjct 140289 CCTGCGAAGATCAATCGTTGCTGATCTGGGGGAATTCCTTCTTTATCCTGGATCTTGGCC 140348
Query 68382 TTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441
|||||| || |||||||| | | ||| ||||| | ||| || || ||||| ||||||
Sbjct 140349 TTGACGTTTTCAATGGTGTCCGAAGCTTCGACTTCGAGGGTAATTGTCTTTCCAGTGAGG 140408
Query 68442 GTCTTGACGAATATCTGCATT 68462
||||| |||||||||||||||
Sbjct 140409 GTCTTCACGAATATCTGCATT 140429
Score = 114 bits (126), Expect = 2e-20
Identities = 110/141 (78%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381
|| ||||| || | || || ||||| || ||||| || |||||||| ||||| || |||
Sbjct 140882 CCTGCGAAGATCAATCGCTGCTGGTCTGGGGGAATTCCCTCCTTGTCCTGAATTTTAGCC 140941
Query 68382 TTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441
|||||| ||| ||||| || | | ||| ||||| | ||| || || ||||| || |||
Sbjct 140942 TTGACGTTCTCAATGGTATCCGAAGCTTCGACTTCAAGGGTAATTGTCTTTCCAGTAAGG 141001
Query 68442 GTCTTGACGAATATCTGCATT 68462
||||||||||| |||||||||
Sbjct 141002 GTCTTGACGAAGATCTGCATT 141022
Score = 111 bits (122), Expect = 3e-19
Identities = 109/141 (77%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381
|||||||| || | ||| || || || || ||||| ||||||||||| || ||||| |||
Sbjct 141178 CCGGCGAAGATCAATCTCTGCTGATCTGGGGGAATTCCTTCCTTGTCCTGGATCTTGGCC 141237
Query 68382 TTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441
|| ||| || || || || | | ||| ||||| | || ||||| ||||| ||||||
Sbjct 141238 TTCACGTTTTCAATCGTATCCGAGGCTTCGACTTCGAGAGTAATGGTCTTTCCAGTGAGG 141297
Query 68442 GTCTTGACGAATATCTGCATT 68462
|||||||| || |||||||||
Sbjct 141298 GTCTTGACAAAGATCTGCATT 141318
Score = 102 bits (112), Expect = 2e-16
Identities = 107/141 (76%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381
|| || || || | || || ||||| || ||||| |||||||| |||||||| || |||
Sbjct 140587 CCAGCAAAGATCAATCGCTGCTGGTCTGGGGGAATTCCTTCCTTATCTTGAATTTTGGCC 140646
Query 68382 TTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441
|| || |||||||| || | || || ||||| | ||||| || ||||| || |||
Sbjct 140647 TTTACATTTTCGATGGTATCGGATGCCTCAACTTCGAGAGTGATTGTCTTTCCAGTAAGG 140706
Query 68442 GTCTTGACGAATATCTGCATT 68462
||||||||||| || ||||||
Sbjct 140707 GTCTTGACGAAGATTTGCATT 140727
Score = 93.3 bits (102), Expect = 8e-14
Identities = 108/146 (74%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381
|| ||||| || |||| || || || || ||||| || ||||||||||||||||| ||
Sbjct 141777 CCTGCGAAGATCAGTCGCTGCTGATCTGGGGGAATTCCCTCCTTGTCTTGAATCTTGGCT 141836
Query 68382 TTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441
|| || || || ||||| | | ||| ||||| | || || || ||||| || ||
Sbjct 141837 TTAACATTTTCAATAGTGTCAGAAGCTTCGACTTCAAGCGTAATAGTCTTTCCTGTCAGA 141896
Query 68442 GTCTTGACGAATATCTGCATTATGCT 68467
|| |||||||| |||||||| ||||
Sbjct 141897 GTTTTGACGAAAATCTGCATAGTGCT 141922
Score = 91.5 bits (100), Expect = 3e-13
Identities = 107/145 (74%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377
||| || ||||| || | | || || || || ||||||||||| ||||| || |||||
Sbjct 139988 CTTACCAGCGAAGATCAAACGCTGCTGATCTGGAGGAATGCCTTCTTTGTCCTGGATCTT 140047
Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGT 68437
||||| || || |||||||| | | || ||||| | ||||| || ||||| ||
Sbjct 140048 GGCCTTCACATTTTCAATGGTGTCGGAAGCCTCAACTTCGAGAGTGATTGTCTTTCCAGT 140107
Query 68438 GAGGGTCTTGACGAATATCTGCATT 68462
||||||||||| || || ||||||
Sbjct 140108 AAGGGTCTTGACAAAGATTTGCATT 140132
>seq8275
Length=204344
Score = 125 bits (138), Expect = 1e-23
Identities = 114/144 (79%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378
|| || || || ||||| ||||| ||||| ||||| || |||||||||||||| |||||
Sbjct 60586 TTACCTGCAAAAATGAGCCTTTGCTGGTCTGGTGGGATTCCTTCCTTGTCTTGGATCTTC 60527
Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTG 68438
||||| ||| |||||||||||| | | ||||||||||| ||||| || || || ||
Sbjct 60526 GCCTTCACGTTCTCGATGGTGTCAGAAGCCTCTACTTCCAAAGTGATTGTCTTCCCGGTC 60467
Query 68439 AGGGTCTTGACGAATATCTGCATT 68462
| ||||| ||||| || ||||||
Sbjct 60466 AATGTCTTCACGAAAATTTGCATT 60443
Score = 120 bits (132), Expect = 6e-22
Identities = 111/141 (79%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381
||||| |||||||||| || ||||| ||||||||||||||||| ||||||||||| |||
Sbjct 59717 CCGGCAAATATGAGTCGCTGCTGGTCTGGTGGAATGCCTTCCTTATCTTGAATCTTGGCC 59658
Query 68382 TTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441
|| || ||| || ||||| | | || ||||||| |||||| || ||||| || |
Sbjct 59657 TTCACATTCTCAATTGTGTCCGAGGCCTCGACTTCCAGGGTGATCGTCTTTCCAGTCAAT 59598
Query 68442 GTCTTGACGAATATCTGCATT 68462
||||| || || || ||||||
Sbjct 59597 GTCTTTACAAAGATTTGCATT 59577
Score = 95.1 bits (104), Expect = 2e-14
Identities = 105/140 (75%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381
||||| || || |||| ||| || || |||||||| |||||||| ||||||||||||||
Sbjct 59423 CCGGCAAAGATAAGTCGTTGCTGATCCGGTGGAATTCCTTCCTTATCTTGAATCTTTGCT 59364
Query 68382 TTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441
|| || || || ||||| | | ||| || || | ||||| || || || || |||
Sbjct 59363 TTCACATTTTCAATAGTGTCGGAGGCTTCAACCTCGAGTGTGATTGTCTTCCCGGTTAGG 59304
Query 68442 GTCTTGACGAATATCTGCAT 68461
|| || || || ||||||||
Sbjct 59303 GTTTTCACAAAGATCTGCAT 59284
Score = 93.3 bits (102), Expect = 8e-14
Identities = 105/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381
|| || || || || | || || || |||||||| |||||||| ||||||||||| |||
Sbjct 60230 CCTGCAAAGATAAGCCGCTGCTGATCAGGTGGAATTCCTTCCTTATCTTGAATCTTAGCC 60171
Query 68382 TTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441
||||| ||||| || || | || || || ||||| || || || ||||| || |
Sbjct 60170 TTGACATTTTCGATTGTATCAGATGCCTCAACCTCCAATGTAATCGTCTTTCCTGTCAAC 60111
Query 68442 GTCTTGACGAATATCTGCATT 68462
||||| || || |||||||||
Sbjct 60110 GTCTTCACAAAGATCTGCATT 60090
Score = 84.2 bits (92), Expect = 4e-11
Identities = 72/89 (81%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|||||||||||||||| ||||| || || ||||||||||| |||||||||||||||||
Sbjct 61049 CCTCCGCGAAGGCGCAGTACCAGATGGAGGGTGGACTCTTTCTGGATGTTATAATCGGAA 60990
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCC 68323
|| || | || || || | ||||| ||
Sbjct 60989 AGAGTACGACCGTCCTCCAGTTGCTTACC 60961
>seq8131
Length=46037
Score = 113 bits (124), Expect = 8e-20
Identities = 110/142 (77%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381
|| ||||| || |||| || || || || ||||| |||||||| || |||||||| |||
Sbjct 31587 CCTGCGAAGATAAGTCGCTGCTGATCAGGCGGAATTCCTTCCTTATCCTGAATCTTGGCC 31646
Query 68382 TTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441
|| || ||||||||| || | | || || || | |||||||||||||||||| ||
Sbjct 31647 TTCACATTCTCGATGGTATCAGAGGCCTCAACCTCGAGGGTGATGGTTTTTCCCGTAAGA 31706
Query 68442 GTCTTGACGAATATCTGCATTA 68463
||||| ||||| || |||||||
Sbjct 31707 GTCTTTACGAAGATTTGCATTA 31728
>seq8716
Length=186993
Score = 109 bits (120), Expect = 1e-18
Identities = 111/145 (77%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378
|| || ||||| || |||| || || || || || || |||||||| || ||||||||
Sbjct 74513 TTACCTGCGAAGATAAGTCGCTGCTGATCAGGCGGGATTCCTTCCTTATCCTGAATCTTG 74572
Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTG 68438
||||| || ||||||||| || | | || || |||| |||||| |||||||||||
Sbjct 74573 GCCTTCACATTCTCGATGGTATCGGAGGCCTCAACCTCCAGGGTGATAGTTTTTCCCGTA 74632
Query 68439 AGGGTCTTGACGAATATCTGCATTA 68463
|| ||||| ||||| || |||||||
Sbjct 74633 AGAGTCTTTACGAAGATTTGCATTA 74657
>seq12057
Length=105320
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
||||||||||||||||||| ||||| | || ||||||| || | |||| ||||||||||
Sbjct 99624 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 99683
Query 84516 CCCACATCGGGC 84527
||| ||||||||
Sbjct 99684 CCCGCATCGGGC 99695
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
||||||||||||||||||| ||||| | || ||||||| || | |||| ||||||||||
Sbjct 99903 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 99962
Query 84516 CCCACATCGGGC 84527
||| ||||||||
Sbjct 99963 CCCGCATCGGGC 99974
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
||||||||||||||||||| ||||| | || ||||||| || | |||| ||||||||||
Sbjct 100076 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 100135
Query 84516 CCCACATCGGGC 84527
||| ||||||||
Sbjct 100136 CCCGCATCGGGC 100147
>seq11992
Length=306990
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
||||||||||||||||||| ||||| | || ||||||| || | |||| ||||||||||
Sbjct 298347 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 298288
Query 84516 CCCACATCGGGC 84527
||| ||||||||
Sbjct 298287 CCCGCATCGGGC 298276
>seq11403
Length=120023
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
||||||||||||||||||| ||||| | || ||||||| || | |||| ||||||||||
Sbjct 39789 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 39730
Query 84516 CCCACATCGGGC 84527
||| ||||||||
Sbjct 39729 CCCGCATCGGGC 39718
>seq11220
Length=321025
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
||||||||||||||||||| ||||| | || ||||||| || | |||| ||||||||||
Sbjct 98505 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 98446
Query 84516 CCCACATCGGGC 84527
||| ||||||||
Sbjct 98445 CCCGCATCGGGC 98434
>seq11096
Length=126596
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
||||||||||||||||||| ||||| | || ||||||| || | |||| ||||||||||
Sbjct 83378 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 83319
Query 84516 CCCACATCGGGC 84527
||| ||||||||
Sbjct 83318 CCCGCATCGGGC 83307
>seq10502
Length=334720
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
||||||||||||||||||| ||||| | || ||||||| || | |||| ||||||||||
Sbjct 129881 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 129822
Query 84516 CCCACATCGGGC 84527
||| ||||||||
Sbjct 129821 CCCGCATCGGGC 129810
>seq9788
Length=20206
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
||||||||||||||||||| ||||| | || ||||||| || | |||| ||||||||||
Sbjct 13588 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 13647
Query 84516 CCCACATCGGGC 84527
||| ||||||||
Sbjct 13648 CCCGCATCGGGC 13659
>seq8873
Length=735772
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
||||||||||||||||||| ||||| | || ||||||| || | |||| ||||||||||
Sbjct 346169 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 346228
Query 84516 CCCACATCGGGC 84527
||| ||||||||
Sbjct 346229 CCCGCATCGGGC 346240
>seq7329
Length=213854
Score = 86.0 bits (94), Expect = 1e-11
Identities = 125/177 (71%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 177135 TCACGGACATTCAGTAGCTTACCACGGAGGGGGAAAATTCCGTAGCGATCCCGACCCACG 177194
|| || ||||| ||||||||||||||||| || || | || |||||||| || || ||
Sbjct 184594 TCGCGAACATTGAGTAGCTTACCACGGAGAGGAAATACACCATAGCGATCGCGGCCGACC 184653
Query 177195 ACAGCAAGGCCAGCTGTGGCAAGCGTGGCGGCAGAGTCACCCTCTGTCAAAATGAGCGTG 177254
||| ||||||||| || | ||| ||| || || ||||| || | ||| || |||
Sbjct 184654 ACACCAAGGCCAGAAACAGCCAACGTTTTGGCTGAATCTCCCTCAGTGAGAATCAGTGTG 184713
Query 177255 CACATTCCAGAGTGCTTCGTGCCCGCCCACGCGGCATCCGTCAATTTTTTGATACCC 177311
|||| | |||| | | ||||| || ||||| ||||||| |||||||
Sbjct 184714 CACAGTTGTGAGTTCCTAGTGCCAGCGTCGTTAGCATCTTCCAATTTTGGGATACCC 184770
>seq5408
Length=229914
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
||||||||||||||||||| ||||| | || ||||||| || | |||| ||||||||||
Sbjct 47466 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 47407
Query 84516 CCCACATCGGGC 84527
||| ||||||||
Sbjct 47406 CCCGCATCGGGC 47395
>seq4018
Length=65016
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
||||||||||||||||||| ||||| | || ||||||| || | |||| ||||||||||
Sbjct 10565 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 10506
Query 84516 CCCACATCGGGC 84527
||| ||||||||
Sbjct 10505 CCCGCATCGGGC 10494
>seq2225
Length=73257
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
||||||||||||||||||| ||||| | || ||||||| || | |||| ||||||||||
Sbjct 67561 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 67620
Query 84516 CCCACATCGGGC 84527
||| ||||||||
Sbjct 67621 CCCGCATCGGGC 67632
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
||||||||||||||||||| ||||| | || ||||||| || | |||| ||||||||||
Sbjct 67840 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 67899
Query 84516 CCCACATCGGGC 84527
||| ||||||||
Sbjct 67900 CCCGCATCGGGC 67911
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
||||||||||||||||||| ||||| | || ||||||| || | |||| ||||||||||
Sbjct 68013 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAGC 68072
Query 84516 CCCACATCGGGC 84527
||| ||||||||
Sbjct 68073 CCCGCATCGGGC 68084
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921473615583800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |