Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Haemonchus_20contortus_20[genbank_20GCA_5F000469685.1_202013-08-27]
12,915 sequences; 319,757,902 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq8832 82.4 8e-11
>seq8832
Length=33236
Score = 82.4 bits (90), Expect = 8e-11
Identities = 96/127 (76%), Gaps = 2/127 (2%)
Strand=Plus/Minus
Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302
|||||| || ||||| || || ||||| ||||| ||||||||| |||| || ||||| |
Sbjct 23723 AATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACCATCACCCTCGAAGTTGAGGCTTC 23664
Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
||| | | | | |||| | || | || || | ||||||||||| |||||| | ||||
Sbjct 23663 CGATACCATCGAGAACG-TCAAGGCCAAGATTCAGGACAAAGAGGGGATTCCCCCAGACC 23605
Query 38362 AACAGCG 38368
| |||||
Sbjct 23604 AGCAGCG 23598
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500092053353600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |