Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Haemonchus_20contortus_20[genbank_20GCA_5F000469685.1_202013-08-27]
12,915 sequences; 319,757,902 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq7056 104 3e-17
>seq7056
Length=51435
Score = 104 bits (114), Expect = 3e-17
Identities = 202/298 (68%), Gaps = 3/298 (1%)
Strand=Plus/Minus
Query 111747 AGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCATT 111806
|| || ||| |||| ||||||||| | ||| | |||||||| || |||||||
Sbjct 22759 AGGCCACAACTGTCTTCTTGTTTCCTCCTAACAATGAGCGAGGATTCGATTGCTGGCATT 22700
Query 111807 TACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCAC 111866
|||| |||| | | ||||||||| ||||| ||| | || ||||| || || || ||
Sbjct 22699 TACGACACTTTGAAGCAATGTGCCCTGATCTCCAAGAGTGCCGGTGGAATAGGTCTGAAC 22640
Query 111867 ATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAATGGTCAATCAGATGGT 111926
| || || ||||||| | || | ||| || |||||||| ||| ||||
Sbjct 22639 GTGCACAATATCAGAGCTACTGGATCGCTGATTGCGGGAACAAATGGCACATCCAATGGC 22580
Query 111927 ATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGCGT 111986
| ||||| |||||||| |||| ||| ||| || || ||||| |||||| || |
Sbjct 22579 TTGATTCCGATGCTTCGAGTATACAACAACACTGCACGTTATGTGGACCAAGGCGGTAAT 22520
Query 111987 ---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGT 112041
|| |||| | ||||| |||| || || |||||||| || || || | ||||
Sbjct 22519 AAGCGACCGGGAGCATTCGCAATCTACCTGGAACCATGGCATGCTGACATTTTCGAGT 22462
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620642188898800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |