Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemonchus_20contortus_20[genbank_20GCA_5F000469685.1_202013-08-27] 12,915 sequences; 319,757,902 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq10502 82.4 9e-11 >seq10502 Length=334720 Score = 82.4 bits (90), Expect = 9e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 159682 CCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCA 159741 ||| |||| || ||| ||||| | ||||| || ||||||||||| |||||||||||| Sbjct 9357 CCAGGTGATTACGGTAGCGATGTTTCGCATCTCAATTTACATAAGACCTTCTGTATTCCA 9298 Query 159742 CATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779 ||||| ||||| || || || | ||||| ||||| || Sbjct 9297 CATGGTGGTGGTGGACCAGGAATCGGTCCAATTGGCGT 9260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587956266484400