Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemonchus_20contortus_20[genbank_20GCA_5F000469685.1_202013-08-27] 12,915 sequences; 319,757,902 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq10502 87.8 2e-12 >seq10502 Length=334720 Score = 87.8 bits (96), Expect = 2e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 || ||||| ||||| | || || || ||||| ||||||||||||||||| ||||||||| Sbjct 9260 ACGCCAATTGGACCGATTCCTGGTCCACCACCACCATGTGGAATACAGAAGGTCTTATGT 9319 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGG 138280 ||||| ||||| | ||||| ||| || |||| ||| Sbjct 9320 AAATTGAGATGCGAAACATCGCTACCGTAATCACCTGG 9357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578904927945800