Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Haemonchus_20contortus_20[genbank_20GCA_5F000469685.1_202013-08-27]
12,915 sequences; 319,757,902 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq9643 93.3 1e-13
>seq9643
Length=160280
Score = 93.3 bits (102), Expect = 1e-13
Identities = 109/146 (75%), Gaps = 1/146 (1%)
Strand=Plus/Minus
Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634
|||||| ||||| | || ||||| ||||| || ||| | ||| ||||| || |||
Sbjct 8766 TCCATAGCTTTGATCAGCCGTCGCTGGATATATCCGGTTTCGGCTGTCTTTACGGCGGTA 8707
Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCC 302694
|| || ||||| ||||||| ||||||||||||||||| | ||| | ||| || ||
Sbjct 8706 TCGATAAGACCTTCACGACCTCCCATAGCATGGAAGAAGAACTCGGCTGGTGTTAAACCA 8647
Query 302695 CCAATAAAGGAGCTCTCAACGAAACC 302720
||| | ||||| ||||||| |||||
Sbjct 8646 GCAAGATAGGAGTTCTCAAC-AAACC 8622
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471574053282355
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |