Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemonchus_20contortus_20[genbank_20GCA_5F000469685.1_202013-08-27] 12,915 sequences; 319,757,902 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq2364 111 4e-19 seq3336 109 1e-18 seq8131 105 2e-17 seq8716 102 2e-16 seq8275 98.7 2e-15 seq8832 96.9 8e-15 seq12545 95.1 3e-14 seq12140 93.3 1e-13 seq12186 91.5 4e-13 seq9146 91.5 4e-13 seq8587 91.5 4e-13 seq61 91.5 4e-13 seq5051 87.8 4e-12 >seq2364 Length=1112 Score = 111 bits (122), Expect = 4e-19 Identities = 102/128 (80%), Gaps = 1/128 (1%) Strand=Plus/Plus Query 7735 TTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCT 7794 |||||||| ||||| ||||| || ||||||||||||| ||||||||||| | | | Sbjct 912 TTGGTAAGGTTCTTCGCGTTGCTTCGAATTAAACCACATGCTCCACCGCTTGTGCGGGCC 971 Query 7795 TCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAAT-ATTTACG 7853 |||||| || |||||||||| ||||||||||||||| | | |||| ||| | || | | Sbjct 972 CCCGTCAATTCCTTTGAGTTTCAACCTTGCGGTCGTACTCCCCAGGCGGAGTGCTTAATG 1031 Query 7854 CGTTAGCT 7861 |||||||| Sbjct 1032 CGTTAGCT 1039 >seq3336 Length=967 Score = 109 bits (120), Expect = 1e-18 Identities = 101/127 (80%), Gaps = 1/127 (1%) Strand=Plus/Minus Query 7736 TGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTT 7795 ||||||| ||||| ||||| || ||||||||||||| ||||||||||| | | | Sbjct 878 TGGTAAGGTTCTTCGCGTTGCTTCGAATTAAACCACATGCTCCACCGCTTGTGCGGGCCC 819 Query 7796 CCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAAT-ATTTACGC 7854 |||||| || |||||||||| ||||||||||||||| | | |||| ||| | || | || Sbjct 818 CCGTCAATTCCTTTGAGTTTCAACCTTGCGGTCGTACTCCCCAGGCGGAGTGCTTAATGC 759 Query 7855 GTTAGCT 7861 ||||||| Sbjct 758 GTTAGCT 752 >seq8131 Length=46037 Score = 105 bits (116), Expect = 2e-17 Identities = 108/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 225574 CCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC 225633 || |||||||||||||| || || || |||||||| |||||||| || || ||||| | Sbjct 31587 CCTGCGAAGATAAGTCGCTGCTGATCAGGCGGAATTCCTTCCTTATCCTGAATCTTGGCC 31646 Query 225634 TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAA 225693 |||||| |||||||| || |||| || || || | ||||| || || ||||| | | Sbjct 31647 TTCACATTCTCGATGGTATCAGAGGCCTCAACCTCGAGGGTGATGGTTTTTCCCGTAAGA 31706 Query 225694 GTTTTTATGAACACTTGCATT 225714 || |||| ||| | ||||||| Sbjct 31707 GTCTTTACGAAGATTTGCATT 31727 >seq8716 Length=186993 Score = 102 bits (112), Expect = 2e-16 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630 || || |||||||||||||| || || || ||||| || |||||||| || || ||||| Sbjct 74513 TTACCTGCGAAGATAAGTCGCTGCTGATCAGGCGGGATTCCTTCCTTATCCTGAATCTTG 74572 Query 225631 TGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTC 225690 ||||||| |||||||| || |||| || || || | ||||| || || ||||| Sbjct 74573 GCCTTCACATTCTCGATGGTATCGGAGGCCTCAACCTCCAGGGTGATAGTTTTTCCCGTA 74632 Query 225691 AAAGTTTTTATGAACACTTGCATT 225714 | ||| |||| ||| | ||||||| Sbjct 74633 AGAGTCTTTACGAAGATTTGCATT 74656 >seq8275 Length=204344 Score = 98.7 bits (108), Expect = 2e-15 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630 || || || || || || | ||| ||||| || || || |||||||||||||||||||| Sbjct 60586 TTACCTGCAAAAATGAGCCTTTGCTGGTCTGGTGGGATTCCTTCCTTGTCTTGGATCTTC 60527 Query 225631 TGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTC 225690 |||||| ||||||||||| || | || || || || ||||| ||||| || ||| Sbjct 60526 GCCTTCACGTTCTCGATGGTGTCAGAAGCCTCTACTTCCAAAGTGATTGTCTTCCCGGTC 60467 Query 225691 AAAGTTTTTATGAACACTTGCATT 225714 || || || | ||| | ||||||| Sbjct 60466 AATGTCTTCACGAAAATTTGCATT 60443 Score = 96.9 bits (106), Expect = 8e-15 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 225574 CCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC 225633 || || || || ||||| || ||||| || ||||| |||||||| ||||| ||||| | Sbjct 59717 CCGGCAAATATGAGTCGCTGCTGGTCTGGTGGAATGCCTTCCTTATCTTGAATCTTGGCC 59658 Query 225634 TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAA 225693 |||||| || || ||||| |||| || || || | ||||||||||| || ||||| Sbjct 59657 TTCACATTCTCAATTGTGTCCGAGGCCTCGACTTCCAGGGTGATCGTCTTTCCAGTCAAT 59598 Query 225694 GTTTTTATGAACACTTGCATT 225714 || |||| || | ||||||| Sbjct 59597 GTCTTTACAAAGATTTGCATT 59577 Score = 95.1 bits (104), Expect = 3e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 225574 CCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC 225633 || || |||||||||||||| || || || ||||| |||||||| ||||| |||||| Sbjct 59423 CCGGCAAAGATAAGTCGTTGCTGATCCGGTGGAATTCCTTCCTTATCTTGAATCTTTGCT 59364 Query 225634 TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAA 225693 |||||| ||| || ||||| |||| ||| || || | ||||| ||||| || || | Sbjct 59363 TTCACATTTTCAATAGTGTCGGAGGCTTCAACCTCGAGTGTGATTGTCTTCCCGGTTAGG 59304 Query 225694 GTTTT 225698 ||||| Sbjct 59303 GTTTT 59299 >seq8832 Length=33236 Score = 96.9 bits (106), Expect = 8e-15 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 225574 CCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC 225633 ||||| ||||| ||||| || ||||| || ||||| ||||||||||| |||||||| | Sbjct 22394 CCAGCAAAGATGAGTCGCTGCTGGTCTGGGGGAATTCCTTCCTTGTCCTGGATCTTGGCC 22453 Query 225634 TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAA 225693 ||||| ||||||||| || || | ||| || || | ||||| ||||| || || | Sbjct 22454 TTCACGTTTTCGATGGTATCGGAAGCTTCGACTTCGAGGGTGATGGTCTTTCCAGTGAGG 22513 Query 225694 GTTTTTATGAACACTTGCATT 225714 || || | ||| | |||||| Sbjct 22514 GTCTTGACGAAGATCTGCATT 22534 Score = 96.9 bits (106), Expect = 8e-15 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 225574 CCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC 225633 ||||||||||| ||||| || || || || ||||| ||||||||||| |||||||| | Sbjct 23876 CCAGCGAAGATCAGTCGCTGCTGATCTGGGGGAATTCCTTCCTTGTCCTGGATCTTGGCC 23935 Query 225634 TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAA 225693 |||||| ||| || || || |||| ||| || || | ||||| ||||| || || | Sbjct 23936 TTCACATTTTCAATAGTATCCGAGGCTTCGACTTCGAGGGTGATGGTCTTTCCAGTGAGG 23995 Query 225694 GTTTTTATGAACACTTGCATT 225714 || || | ||| | |||||| Sbjct 23996 GTCTTAACGAAGATCTGCATT 24016 Score = 95.1 bits (104), Expect = 3e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 225574 CCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC 225633 || |||||||| |||||||| || || || ||||| || ||||||||||| ||||| Sbjct 24478 CCTGCGAAGATCAGTCGTTGCTGATCTGGGGGAATTCCCTCCTTGTCTTGAATCTTGGCT 24537 Query 225634 TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAA 225693 || ||| ||| |||||||| || | ||| || || | || || ||||| || |||| | Sbjct 24538 TTAACATTTTCAATGGTGTCAGAAGCTTCGACTTCAAGTGTAATAGTCTTTCCTGTCAGA 24597 Query 225694 GTTTTTATGAACACTTGCAT 225713 ||||| | ||| | ||||| Sbjct 24598 GTTTTGACGAAAATCTGCAT 24617 Score = 93.3 bits (102), Expect = 1e-13 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 225574 CCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC 225633 ||||| ||||| | ||| || ||||| || ||||| |||||||| || || || || | Sbjct 23287 CCAGCAAAGATCAATCGCTGCTGGTCTGGTGGAATTCCTTCCTTATCCTGAATTTTGGCC 23346 Query 225634 TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAA 225693 || ||| ||||||||| || || | ||| || || | ||||||||||| || || | | Sbjct 23347 TTTACATTTTCGATGGTATCGGATGCTTCAACTTCGAGAGTGATCGTCTTTCCAGTAAGA 23406 Query 225694 GTTTTTATGAACACTTGCATT 225714 || || | ||| | ||||||| Sbjct 23407 GTCTTGACGAAGATTTGCATT 23427 Score = 93.3 bits (102), Expect = 1e-13 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 225574 CCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC 225633 ||||| ||||| | |||||| || || || ||||| ||||||||||| |||||||| | Sbjct 24170 CCAGCAAAGATCAATCGTTGCTGATCTGGGGGAATTCCTTCCTTGTCCTGGATCTTGGCC 24229 Query 225634 TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAA 225693 |||||| ||| || || || |||| ||| || || | ||||| ||||| || || | Sbjct 24230 TTCACATTTTCAATAGTATCCGAGGCTTCGACTTCGAGGGTGATGGTCTTTCCAGTGAGG 24289 Query 225694 GTTTTTATGAACACTTGCATT 225714 || || | ||| | |||||| Sbjct 24290 GTCTTAACGAAGATCTGCATT 24310 Score = 87.8 bits (96), Expect = 4e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 225574 CCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC 225633 ||||||||||| | || || || ||||| ||||| ||||| ||||| |||||||| | Sbjct 22689 CCAGCGAAGATCAAACGCTGCTGATCGGGAGGAATGCCTTCTTTGTCCTGGATCTTGGCC 22748 Query 225634 TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAA 225693 |||||| ||| ||||| || || | || || || | ||||| |||||||| || | Sbjct 22749 TTCACATTTTCAATGGTATCGGAAGCCTCAACTTCGAGGGTGATGGTCTTGCCAGTGAGG 22808 Query 225694 GTTTTTATGAACACTTGCATT 225714 || || | ||| | |||||| Sbjct 22809 GTCTTGACGAAGATCTGCATT 22829 Score = 84.2 bits (92), Expect = 5e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 225574 CCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC 225633 ||||||||||| | |||||| || || || ||||| ||||| || || |||||||| | Sbjct 22986 CCAGCGAAGATCAATCGTTGCTGATCTGGGGGAATTCCTTCTTTATCCTGGATCTTGGCC 23045 Query 225634 TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 || || |||||||||||| || | ||| || || | ||||| ||||| || || Sbjct 23046 TTGACGTTTTCGATGGTGTCCGAAGCTTCGACTTCAAGGGTGATTGTCTTTCCAGT 23101 >seq12545 Length=293880 Score = 95.1 bits (104), Expect = 3e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||| || || ||||||||||| || || ||||| || || ||||||||||| |||||||| Sbjct 13006 GAAGATCTGTCCATCAGTAATGGAAATGACATTGGTGGGAATATAAGCAGATACATCACC 13065 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAA 4576 |||||||| || | || || | || || || ||||||||||||| Sbjct 13066 AGCTTGTGTCTCAATGACTGGAAGAGCAGTCAGAGATCCACCACCAA 13112 >seq12140 Length=4113 Score = 93.3 bits (102), Expect = 1e-13 Identities = 98/128 (77%), Gaps = 1/128 (1%) Strand=Plus/Minus Query 7735 TTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCT 7794 |||||||| ||||| ||||| ||| |||||| || ||| |||| |||||| | | | Sbjct 285 TTGGTAAGGTTCTTCGCGTTGCATCGAATTAATCCGCATGCTCCGCCGCTTGTGCGGGCC 226 Query 7795 TCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATA-TTTACG 7853 |||||| || |||||||||||| |||||||| |||| | | |||| || | || | | Sbjct 225 CCCGTCAATTCCTTTGAGTTTTAGCCTTGCGGCCGTACTCCCCAGGCGGGGCACTTAATG 166 Query 7854 CGTTAGCT 7861 |||||||| Sbjct 165 CGTTAGCT 158 >seq12186 Length=3992 Score = 91.5 bits (100), Expect = 4e-13 Identities = 117/158 (74%), Gaps = 4/158 (3%) Strand=Plus/Minus Query 370668 ATAATTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGC 370727 ||| ||||||||||||||||||||| || |||||||||| || | |||| || || Sbjct 3728 ATACTTCAGGATGACCAAAAAATCAAAACAAATGTTGATGAATCAACGGATTACCACCAG 3669 Query 370728 CTGATGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAAAACAG--TTGGTTTATC 370785 ||| ||||||||||| |||||| ||||| | ||| ||||| | || || || |||| Sbjct 3668 TTGAAGGATCAAAAAACAAAGTATTTAAATTACGATCGGTTAACAAAGTATTTGTGTATC 3609 Query 370786 -AtttttttAATTATTT-TTCAGTTAATAATAATTATT 370821 |||| ||| |||| | | ||| ||| ||| ||| Sbjct 3608 GGGTTTTATAACAATTTGTATAATTATTAAAAATAATT 3571 >seq9146 Length=28433 Score = 91.5 bits (100), Expect = 4e-13 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 370673 TCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGAT 370732 |||||||||||||||||||| || ||||||||||||| | |||| ||||| || Sbjct 3898 TCAGGATGACCAAAAAATCAAAACAAATGTTGATAAATTAACGGATTACCTCCTGTCGAA 3839 Query 370733 GGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770 ||||||||||| |||||| ||||| | ||||||||| Sbjct 3838 GGATCAAAAAATGAAGTATTTAAATTACGATCAGTTAA 3801 Score = 91.5 bits (100), Expect = 4e-13 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 370673 TCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGAT 370732 |||||||||||||||||||| || ||||||||||||| | |||| ||||| || Sbjct 17118 TCAGGATGACCAAAAAATCAAAACAAATGTTGATAAATTAACGGATTACCTCCTGTCGAA 17059 Query 370733 GGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770 ||||||||||| |||||| ||||| | ||||||||| Sbjct 17058 GGATCAAAAAATGAAGTATTTAAATTACGATCAGTTAA 17021 Score = 84.2 bits (92), Expect = 5e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 7567 ATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATAGGC 7626 ||||||||||| || || || | |||||||| ||| | || ||||| ||| || || Sbjct 3345 ATTATTACGGCTCACGCAATTTTGATGATTTTTTTTATAGTAATGCCTACTATAATTGGA 3404 Query 7627 GGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCCAAGG 7686 || || || |||||| | | |||||||| | || || |||||||| |||||| | Sbjct 3405 GGGTTTGGTAATTGAATGTTGCCTTTAATATTAGGGGCACCTGATATAAGTTTTCCTCGT 3464 Query 7687 CTTAACAATATAAGTTTTTGATTACTACC 7715 | || ||| |||| |||||||| |||| Sbjct 3465 TTAAATAATTTAAGATTTTGATTGTTACC 3493 Score = 84.2 bits (92), Expect = 5e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 7567 ATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATAGGC 7626 ||||||||||| || || || | |||||||| ||| | || ||||| ||| || || Sbjct 16565 ATTATTACGGCTCACGCAATTTTGATGATTTTTTTTATAGTAATGCCTACTATAATTGGA 16624 Query 7627 GGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCCAAGG 7686 || || || |||||| | | |||||||| | || || |||||||| |||||| | Sbjct 16625 GGGTTTGGTAATTGAATGTTGCCTTTAATATTAGGGGCACCTGATATAAGTTTTCCTCGT 16684 Query 7687 CTTAACAATATAAGTTTTTGATTACTACC 7715 | || ||| |||| |||||||| |||| Sbjct 16685 TTAAATAATTTAAGATTTTGATTGTTACC 16713 >seq8587 Length=192155 Score = 91.5 bits (100), Expect = 4e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 225574 CCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC 225633 || |||||||| ||||| || || || || ||||| || ||||||||||| ||||| Sbjct 141777 CCTGCGAAGATCAGTCGCTGCTGATCTGGGGGAATTCCCTCCTTGTCTTGAATCTTGGCT 141836 Query 225634 TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAA 225693 || ||| ||| || ||||| || | ||| || || | ||| || ||||| || |||| | Sbjct 141837 TTAACATTTTCAATAGTGTCAGAAGCTTCGACTTCAAGCGTAATAGTCTTTCCTGTCAGA 141896 Query 225694 GTTTTTATGAACACTTGCAT 225713 ||||| | ||| | ||||| Sbjct 141897 GTTTTGACGAAAATCTGCAT 141916 Score = 86.0 bits (94), Expect = 1e-11 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 225574 CCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC 225633 ||||| ||||| ||||| || ||||| || ||||| |||||||||||||| ||||| Sbjct 139693 CCAGCAAAGATCAGTCGCTGCTGGTCCGGGGGAATTCCTTCCTTGTCTTGAATCTTGGCT 139752 Query 225634 TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAA 225693 ||||| |||||||| || || | || || || | ||||| |||||||| || | Sbjct 139753 TTCACGTTCTCGATGGTATCAGAAGCCTCAACTTCGAGGGTGATGGTCTTGCCAGTGAGG 139812 Query 225694 GTTTTTATGAACACTTGCAT 225713 || || | ||| | ||||| Sbjct 139813 GTCTTGACGAAGATCTGCAT 139832 Score = 86.0 bits (94), Expect = 1e-11 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629 ||| ||||||||||| | || || || || || ||||| ||||| ||||| |||||||| Sbjct 139988 CTTACCAGCGAAGATCAAACGCTGCTGATCTGGAGGAATGCCTTCTTTGTCCTGGATCTT 140047 Query 225630 TTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 ||||||| ||| |||||||| || | || || || | ||||| ||||| || || Sbjct 140048 GGCCTTCACATTTTCAATGGTGTCGGAAGCCTCAACTTCGAGAGTGATTGTCTTTCCAGT 140107 Query 225690 CAAAGTTTTTATGAACACTTGCATT 225714 | || || | || | ||||||| Sbjct 140108 AAGGGTCTTGACAAAGATTTGCATT 140132 >seq61 Length=2369 Score = 91.5 bits (100), Expect = 4e-13 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 370673 TCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGAT 370732 |||||||||||||||||||| || ||||||||||||| | |||| ||||| || Sbjct 327 TCAGGATGACCAAAAAATCAAAACAAATGTTGATAAATTAACGGATTACCTCCTGTCGAA 268 Query 370733 GGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770 ||||||||||| |||||| ||||| | ||||||||| Sbjct 267 GGATCAAAAAATGAAGTATTTAAATTACGATCAGTTAA 230 >seq5051 Length=722 Score = 87.8 bits (96), Expect = 4e-12 Identities = 81/99 (82%), Gaps = 3/99 (3%) Strand=Plus/Minus Query 6765 ACTTGAGAGAATGATCAGCCACATTGGGACTGAAA-ACGGCCCAAGTCTTCTAAAAG-GG 6822 || |||||| ||||| |||||| ||||||||| | |||||||| | || ||| | || Sbjct 429 ACCTGAGAGGGTGATCGGCCACACTGGGACTGAGACACGGCCCA-GACTCCTACGGGAGG 371 Query 6823 CAGCAGTGGAGAATATTTGACAATGGGCGAAAGCTTGAT 6861 ||||||||| ||||||| ||||||||||||||| |||| Sbjct 370 CAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT 332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192333867763010