Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemonchus_20contortus_20[genbank_20GCA_5F000469685.1_202013-08-27] 12,915 sequences; 319,757,902 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq7663 87.8 2e-12 >seq7663 Length=436145 Score = 87.8 bits (96), Expect = 2e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 4818 ATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGA 4877 ||||| || || || || |||||||||||||| || |||||||| || ||||| ||| Sbjct 297818 ATATAGGTCTCAATAAGCTTACTATACATTTCAGAGTGAATATTTTCGATGGCAATTTGA 297759 Query 4878 AATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTT 4918 || ||||||||| ||| ||| || | ||||||||||| || Sbjct 297758 AAACCGTAAAAGAATCGAGCCTCAGGAACTTGAACTTCTTT 297718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426982381725695