Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Haemonchus_20contortus_20[genbank_20GCA_5F000469685.1_202013-08-27]
12,915 sequences; 319,757,902 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq7663 87.8 2e-12
>seq7663
Length=436145
Score = 87.8 bits (96), Expect = 2e-12
Identities = 80/101 (79%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 4818 ATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGA 4877
||||| || || || || |||||||||||||| || |||||||| || ||||| |||
Sbjct 297818 ATATAGGTCTCAATAAGCTTACTATACATTTCAGAGTGAATATTTTCGATGGCAATTTGA 297759
Query 4878 AATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTT 4918
|| ||||||||| ||| ||| || | ||||||||||| ||
Sbjct 297758 AAACCGTAAAAGAATCGAGCCTCAGGAACTTGAACTTCTTT 297718
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 426982381725695
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |