Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemonchus_20contortus_20[genbank_20GCA_5F000469685.1_202013-08-27] 12,915 sequences; 319,757,902 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq7663 95.1 1e-14 >seq7663 Length=436145 Score = 95.1 bits (104), Expect = 1e-14 Identities = 93/119 (78%), Gaps = 1/119 (1%) Strand=Plus/Minus Query 23761 TTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATA 23820 ||| |||| | |||| | ||||| || ||||| || ||||||||||||||| |||||| Sbjct 297835 TTTCCTTC-TCATCTCTGATATAGGTCTCAATAAGCTTACTATACATTTCAGAGTGAATA 297777 Query 23821 TTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATT 23879 ||||| || ||||| ||||| || ||||| ||| ||| |||| | |||||| || || Sbjct 297776 TTTTCGATGGCAATTTGAAAACCGTAAAAGAATCGAGCCTCAGGAACTTGAACTTCTTT 297718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521403812281000