Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemonchus_20placei_20[genbank_20GCA_5F000951295.1_202014-09-26] 24,923 sequences; 259,125,910 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq2750 87.8 3e-12 >seq2750 Length=29324 Score = 87.8 bits (96), Expect = 3e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || ||| | ||||| | ||||| || || || || | ||| |||| ||| Sbjct 9516 AATGCAGATCTTTGTGAAGACGTTGACAGGAAAGACGATTACATTGGAGGTTGAGGCATC 9457 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||||||| ||| | || || || |||||||||||||| || ||||||||||| Sbjct 9456 TGATACAATCGAAAATGTCAAGGCCAAGATACAAGATAAAGAAGGAATTCCACCTGATCA 9397 Query 124658 ACAAAGGCTTATTTTTGCAGG 124678 || | ||||| |||||||| Sbjct 9396 GCAGCGACTTATCTTTGCAGG 9376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755220647126400