Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemonchus_20placei_20[genbank_20GCA_5F000951295.1_202014-09-26] 24,923 sequences; 259,125,910 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq2750 95.1 1e-14 >seq2750 Length=29324 Score = 95.1 bits (104), Expect = 1e-14 Identities = 107/141 (76%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || ||||| ||| | || || ||| | || || | ||||||||| | || Sbjct 8561 ATGCAGATCTTCGTAAAAACTCTAACTGGAAAAACTATTACTCTGGAAGTGGAGGCCTCC 8502 Query 25059 GACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| |||| || || | ||| ||||||||||| ||||||||||| || Sbjct 8501 GACACGATCGAAAATGTGAAAGCTAAGATTCAG-GACAAAGAAGGAATTCCACCTGATCA 8443 Query 25118 ACAGCGGATTATTTTTGCCGG 25138 |||||| |||| |||||||| Sbjct 8442 ACAGCGACTTATCTTTGCCGG 8422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433196377026245