Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemonchus_20placei_20[genbank_20GCA_5F000951295.1_202014-09-26] 24,923 sequences; 259,125,910 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq2750 87.8 2e-12 >seq2750 Length=29324 Score = 87.8 bits (96), Expect = 2e-12 Identities = 106/142 (75%), Gaps = 2/142 (1%) Strand=Plus/Plus Query 64304 CCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGC 64363 |||||| | || ||||| |||||||| || ||||| ||||| || ||||| || || || Sbjct 9869 CCGGCAAATATAAGCCGTTGCTGGTCTGGTGGAATGCCTTCCTTATCTTGAATCTTG-GC 9927 Query 64364 TTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAA 64422 ||| ||| ||| | ||| || ||| || ||||| | || | ||||| || ||||| Sbjct 9928 TTTCACATTCTCGATTGTGTCCGAGGCCTCAACTTCCAGGGTGATCGTCTTTCCAGTCAA 9987 Query 64423 AGTTTTTACGAAAATTTGCATT 64444 || || || |||||||||||| Sbjct 9988 TGTCTTCACAAAAATTTGCATT 10009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499489141908120