Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemonchus_20placei_20[genbank_20GCA_5F000951295.1_202014-09-26] 24,923 sequences; 259,125,910 total letters Query= NC_013085.1 Length=194454 Score E Sequences producing significant alignments: (Bits) Value seq8777 82.4 9e-11 >seq8777 Length=4537 Score = 82.4 bits (90), Expect = 9e-11 Identities = 121/170 (71%), Gaps = 15/170 (9%) Strand=Plus/Plus Query 176303 GAATGGAGAATAGGAGACTCGAACTCCTGACAGCCTGCTTGCAAAGCAGGTGCTCTA-CC 176361 || ||||||||| || |||||| |||| |||||||||||||||||||||||| || Sbjct 4176 GAGTGGAGAATAACGGATTCGAACCGTTGACCCCCTGCTTGCAAAGCAGGTGCTCTAGCC 4235 Query 176362 AACTGAGCTAATTCCCC------TGGAGCC-----ACAAGTCGGACTTGAACCGACGACC 176410 | |||||||||| |||| | ||| | | || | ||||||||| | ||||| Sbjct 4236 AGCTGAGCTAATCCCCCGTTCAGTAGAGACGTAGTCCCAGGCAGACTTGAACTGCCGACC 4295 Query 176411 TACGGTTTACAAAACCGTTGCTCTATCCAGCTGAGCTATAG---TGGCAT 176457 | | ||| | | |||||| ||| ||||||||||| |||||| Sbjct 4296 TCCACATTATCAGTGTGGCGCTCTAACCAACTGAGCTATAGGACTGGCAT 4345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 621930984795120