Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemonchus_20placei_20[genbank_20GCA_5F000951295.1_202014-09-26] 24,923 sequences; 259,125,910 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq10270 82.4 9e-11 >seq10270 Length=2790 Score = 82.4 bits (90), Expect = 9e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 || ||||| ||||| | || || || ||||| ||||||||||| ||||| ||||||||| Sbjct 1889 ACGCCAATTGGACCGATTCCTGGCCCGCCACCACCATGTGGAATGCAGAAGGTCTTATGT 1948 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGG 138280 ||||| ||||| | ||||| ||| || |||| ||| Sbjct 1949 AAATTGAGATGCGAAACATCGCTACCGTAATCACCTGG 1986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578818020285960