Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemonchus_20placei_20[genbank_20GCA_5F000951295.1_202014-09-26] 24,923 sequences; 259,125,910 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq88 98.7 3e-15 >seq88 Length=130463 Score = 98.7 bits (108), Expect = 3e-15 Identities = 110/146 (75%), Gaps = 1/146 (1%) Strand=Plus/Plus Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634 |||||| ||||| | || ||||||||||| || ||| || ||| || || || ||| Sbjct 78466 TCCATAGCTTTGATCAGTCGTCGCTGAATATATCCGGTTTCAGCTGTCTTCACTGCGGTA 78525 Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCC 302694 || || ||||| ||||||| ||||||||||||||||| | ||| | ||| || || Sbjct 78526 TCGATAAGACCTTCACGACCTCCCATAGCATGGAAGAAGAACTCGGCTGGTGTTAAACCA 78585 Query 302695 CCAATAAAGGAGCTCTCAACGAAACC 302720 ||| | ||||| ||||||| ||||| Sbjct 78586 GCAAGATAGGAGTTCTCAAC-AAACC 78610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471347610465051