Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemonchus_20placei_20[genbank_20GCA_5F000951295.1_202014-09-26] 24,923 sequences; 259,125,910 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq2794 87.8 1e-12 >seq2794 Length=28921 Score = 87.8 bits (96), Expect = 1e-12 Identities = 119/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 34319 CAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCA 34378 |||| ||||| || || ||| | ||||| | |||||||| |||||||||||| || | Sbjct 6639 CAGTTTCCGGATTATCGCATGCTGGACAGAGAACAAACTTCTTGATGAAACCATCCAGGA 6698 Query 34379 GGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAAT 34438 || || ||||| | | ||| || || ||||||||| | || |||||| | | Sbjct 6699 TATCTTGCAACTTCGCTGCGTCATGTTCACCATTGACGATGTAACGCTCGTTTCTCGCGT 6758 Query 34439 CGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGG 34484 || | ||||| ||||||| |||||| || ||||| ||||| || Sbjct 6759 CGTAATTTGTTTGAGCGCCCAACTCGCAGCCAAAGTATTTTGTTGG 6804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412716199751039