Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemonchus_20placei_20[genbank_20GCA_5F000951295.1_202014-09-26] 24,923 sequences; 259,125,910 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq3076 93.3 3e-14 >seq3076 Length=26571 Score = 93.3 bits (102), Expect = 3e-14 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 29647 CCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGT 29706 ||||| | ||||||| |||||||| || ||||| || |||||||| || | || Sbjct 25145 CCAGCGAAGATCAATCGCTGCTGATCTGGGGGAATCCCTTCTTTGTCCTGGATCTTGGCC 25204 Query 29707 TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAG 29766 |||||| |||| | || || || ||| ||||||||||| ||||| || ||||| | Sbjct 25205 TTGACATTTTCAATGGTATCTGAGGCTTCGACTTCAAGAGTAATAGTCTTTCCAGTAAGA 25264 Query 29767 GTTTTAACAAATATCTGCATT 29787 || || ||||| ||||||||| Sbjct 25265 GTCTTGACAAAGATCTGCATT 25285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385102190029143