Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemonchus_20placei_20[genbank_20GCA_5F000951295.1_202014-09-26] 24,923 sequences; 259,125,910 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq5978 96.9 3e-15 >seq5978 Length=11568 Score = 96.9 bits (106), Expect = 3e-15 Identities = 86/108 (80%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 43914 AAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATA 43973 ||||||||||| | || || || |||| ||||| || |||||||||||||| ||||||| Sbjct 5502 AAGAAGTTCAAGTTCCTGAGGCTCGATTCTTTTACGGTTTTCAAATTGCCATCGAAAATA 5443 Query 43974 TTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATG 44021 |||| || |||||||| ||| || || || || || |||| ||||| Sbjct 5442 TTCACTCTGAAATGTATAGTAAGCTTATTGAGACCTATATCAGAGATG 5395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397335273112615