Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemonchus_20placei_20[genbank_20GCA_5F000951295.1_202014-09-26] 24,923 sequences; 259,125,910 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq3288 84.2 3e-11 >seq3288 Length=24717 Score = 84.2 bits (92), Expect = 3e-11 Identities = 111/149 (74%), Gaps = 4/149 (3%) Strand=Plus/Plus Query 104695 CCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTG-AGGAGA 104753 ||| ||| | |||| ||||||||||||||| ||| | |||||||||||||| | | | || Sbjct 15926 CCGTGATTTGTTCTACGCTCTCTGGATTCCTGATTTGTTCATGAAGAGAGTGGAACGCGA 15985 Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGA-TGCCGTGGGT 104812 || ||||||| ||| | ||||| | | | ||||| ||| || ||| | ||| Sbjct 15986 -TGAGGATTGGTCGCTCATGTGTCCTCATGAATCGCCTGGACTCCATGAGTGCTG-GGGA 16043 Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTA 104841 || | ||||||| |||||||||||||| Sbjct 16044 GAAGCCTTTGAAGAGCTTTACACAAAGTA 16072 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583079092388520